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@brain-image-library Brain Image Library

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    28 repositories

    • bil_site

      Public
      The submission portal for the Brain Image Library
      HTML
      •
      GNU General Public License v3.0
      •1•1•25•7•Updated Apr 16, 2026Apr 16, 2026

    • py-brain-sdk

      Public
      A Python package designed for seamless integration with the Brain Image Library APIs, facilitating efficient retrieval and manipulation of valuable neuroscience…
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Apr 14, 2026Apr 14, 2026

    • py-spectrabrainz

      Public
      Python package the is used to backup datasets to the tape system
      Python
      •0•0•0•0•Updated Apr 3, 2026Apr 3, 2026

    • py-inventory-builder

      Public
      Inventory script that generates a JSON file with file level stats. Replaces manifest scripts.
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Mar 22, 2026Mar 22, 2026

    • bil_info_site

      Public
      HTML
      •4•0•0•0•Updated Jan 20, 2026Jan 20, 2026

    • group_doi_metadata

      Public
      Metadata files for obtaining a Group DOI at the Brain Image Library
      0•0•0•0•Updated Sep 5, 2025Sep 5, 2025

    • ondemand-codeserver

      Public
      Codeserver Configuration
      ondemand
      ondemand
      GNU General Public License v3.0
      •0•0•0•0•Updated May 21, 2025May 21, 2025

    • ondemand-desktop

      Public
      OOD Interactive Desktop YAML file
      0•0•0•0•Updated May 21, 2025May 21, 2025

    • py-brain-inventory

      Public
      Python package that can get data from BIL inventories
      data-vizdata-analysisbrain-image-library
      data-vizdata-analysisbrain-image-library
      Python
      •
      GNU General Public License v3.0
      •0•1•23•3•Updated Jan 20, 2025Jan 20, 2025

    • workshops

      Public
      Jupyter Notebook
      •1•3•0•0•Updated Dec 5, 2024Dec 5, 2024

    • py-brain-sdk-documentation

      Public
      The docs
      Python
      •0•0•0•0•Updated Nov 22, 2024Nov 22, 2024

    • python-modulefiles

      Public
      LMOD modulefilesf for different Python/R package managers
      Lua
      •0•0•0•0•Updated Nov 5, 2024Nov 5, 2024

    • neuroglancer-viewer

      Public
      React.js frontend configured to hold neuroglancer panels
      JavaScript
      •0•0•0•0•Updated Jun 10, 2024Jun 10, 2024

    • singularity-jxl-tools

      Public
      JPEG XL image format reference implementation.
      0•0•0•0•Updated May 1, 2024May 1, 2024

    • singularity-eog

      Public
      Eye of GNOME provides basic effects for improved viewing, such as zooming, full-screen, rotation, and transparent image background control.
      visualizationsingularityviz
      visualizationsingularityviz
      Shell
      •
      Apache License 2.0
      •0•0•0•0•Updated Apr 19, 2024Apr 19, 2024

    • singularity-gnuplot

      Public
      gnuplot is a command-line program that can generate two- and three-dimensional plots of functions, data, and data fits.
      visualizationsingularityviz
      visualizationsingularityviz
      Shell
      •
      Apache License 2.0
      •0•0•0•0•Updated Apr 18, 2024Apr 18, 2024

    • singularity-gimp

      Public
      GIMP is a cross-platform image editor available for GNU/Linux, macOS, Windows and more operating systems. It is free software, you can change its source code an…
      Lua
      •
      Apache License 2.0
      •0•0•0•0•Updated Apr 18, 2024Apr 18, 2024

    • napari-bil-data-viewer

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•6•0•0•Updated Feb 28, 2024Feb 28, 2024

    • flask-inventory-api

      Public
      Brain Image Library Inventory API
      Python
      •0•0•0•0•Updated Aug 24, 2023Aug 24, 2023

    • py-brain-inventory-gource

      Public
      Create Gource video from py-brain-inventory
      gource-visualizationsamsprecollege
      gource-visualizationsamsprecollege
      Shell
      •
      GNU General Public License v3.0
      •0•0•3•3•Updated Aug 3, 2023Aug 3, 2023

    • py-brain-logs

      Public
      Just scripts to manage web logs
      Jupyter Notebook
      •0•0•6•4•Updated Jul 19, 2023Jul 19, 2023

    • py-brain-logs-gource

      Public
      0•0•0•0•Updated Jul 19, 2023Jul 19, 2023

    • brain-lib-org-redirect

      Public
      HTML
      •0•0•0•0•Updated Jul 10, 2023Jul 10, 2023

    • GetYourBrainPipelined

      Public
      Example scripts for setting up a brain processing pipeline
      Python
      •2•0•0•0•Updated Mar 10, 2022Mar 10, 2022

    • container-bioformats2raw

      Public
      Containerization of bioformats2raw
      0•0•0•0•Updated Mar 9, 2022Mar 9, 2022

    • public-facing-documentation

      Public
      Python
      •0•0•0•0•Updated Mar 8, 2022Mar 8, 2022

    • simple-slack

      Public
      Helper script to communicate with team members on Slack
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Aug 17, 2021Aug 17, 2021

    • bil_site_v2

      Public
      Version 2 of bil_site
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jan 11, 2019Jan 11, 2019
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