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    14 repositories

    • BioReactorDesign

      Public
      Bio Reactor Design (BiRD): a toolbox to simulate and analyze different designs of bioreactors in OpenFOAM
      Liquid
      •
      BSD 3-Clause "New" or "Revised" License
      •17•0•0•1•Updated Sep 8, 2025Sep 8, 2025

    • pyciemss

      Public
      Causal and probabilistic reasoning with continuous time dynamical systems
      Python
      •
      Other
      •11•21•33•6•Updated Aug 29, 2025Aug 29, 2025

    • program-milestones

      Public
      Repository for materials related to program milestone hackathon and evaluation events
      Jupyter Notebook
      •10•0•15•0•Updated Apr 8, 2025Apr 8, 2025

    • chirho_diffeqpy

      Public
      A diffeqpy (DifferentialEquations.jl) backend for chirho's dynamical systems module.
      Python
      •
      Apache License 2.0
      •1•0•1•0•Updated Mar 10, 2025Mar 10, 2025

    • chirho

      Public
      An experimental language for causal reasoning
      Python
      •
      Apache License 2.0
      •22•0•1•0•Updated Feb 3, 2025Feb 3, 2025

    • PyRenew

      Public
      Python package for multi-signal Bayesian renewal modeling with JAX and NumPyro.
      Python
      •
      Apache License 2.0
      •11•0•0•0•Updated Oct 24, 2024Oct 24, 2024

    • multisignal-epi-inference

      Public
      Python package for statistical inference and forecast of epi models using multiple signals
      Python
      •11•1•11•0•Updated Sep 16, 2024Sep 16, 2024

    • causaleffectpy

      Public
      Python package to compute conditional and non-conditional causal effects.
      Python
      •
      MIT License
      •5•1•4•1•Updated Aug 15, 2024Aug 15, 2024

    • mira

      Public
      MIRA modeling framework
      Jupyter Notebook
      •
      BSD 2-Clause "Simplified" License
      •11•0•0•0•Updated Apr 9, 2024Apr 9, 2024

    • graphcast

      Public
      Python
      •
      Apache License 2.0
      •993•0•0•0•Updated Feb 12, 2024Feb 12, 2024

    • simulation-integration

      Public
      Live Test Runner that checks the integration between Terarium Data Service and TA3
      Python
      •3•0•0•0•Updated Dec 14, 2023Dec 14, 2023

    • Model-Representations

      Public
      Modeling framework representations for ASKEM
      Julia
      •2•0•0•0•Updated Dec 5, 2023Dec 5, 2023

    • Decapodes.jl

      Public
      A framework for composing and simulating multiphysics systems
      Julia
      •
      MIT License
      •19•0•0•0•Updated Oct 20, 2023Oct 20, 2023

    • SARS-CoV-2-variants-of-concern-in-Ontario

      Public
      Code for this paper: https://www.nature.com/articles/s41598-022-06159-x
      MATLAB
      •2•0•0•4•Updated Jul 9, 2023Jul 9, 2023
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