Repositories list

• sciencebeam-trainer-delft

  Public
  Wrapper around https://github.com/kermitt2/delft

  sciencebeam

  sciencebeam

  Python

  •

  MIT License

  •22 forks•55 stars•00 issues•99 pull requests•Updated Apr 18, 2026Apr 18, 2026

• website

  Public

  eLifePathways/website’s past year of commit activity
  Astro

  •

  MIT License

  •00 forks•00 stars•11 issue•00 pull requests•Updated Apr 17, 2026Apr 17, 2026

• sciencebeam-parser

  Public
  A set of tools to allow PDF to XML conversion, utilising Apache Beam and other tools. The aim of this project is to bring multiple tools together to generate a…

  grobidsciencebeam

  grobidsciencebeam

  Python

  •

  MIT License

  •3232 forks•297297 stars•11 issue•00 pull requests•Updated Apr 16, 2026Apr 16, 2026

• Kotahi

  Public

  eLifePathways/Kotahi’s past year of commit activity
  kotahi

  kotahi

  JavaScript

  •

  Other

  •55 forks•1515 stars•7676 issues•11 pull request•Updated Apr 15, 2026Apr 15, 2026

• sciencebeam-trainer-grobid-tools

  Public

  eLifePathways/sciencebeam-trainer-grobid-tools’s past year of commit activity
  ScienceBeam Trainer Tools for GROBID

  grobidsciencebeam

  grobidsciencebeam

  Python

  •

  MIT License

  •00 forks•00 stars•00 issues•66 pull requests•Updated Apr 14, 2026Apr 14, 2026

• sciencebeam-judge

  Public
  XML Conversion Evaluation

  sciencebeam

  sciencebeam

  Jupyter Notebook

  •

  MIT License

  •00 forks•00 stars•00 issues•1212 pull requests•Updated Apr 13, 2026Apr 13, 2026

• sciencebeam-trainer-grobid

  Public

  eLifePathways/sciencebeam-trainer-grobid’s past year of commit activity
  ScienceBeam Trainer for GROBID

  sciencebeam

  sciencebeam

  Python

  •

  MIT License

  •00 forks•11 star•00 issues•44 pull requests•Updated Apr 13, 2026Apr 13, 2026

• sciencebeam-utils

  Public
  ScienceBeam Utils

  sciencebeam

  sciencebeam

  Python

  •

  MIT License

  •11 fork•22 stars•00 issues•44 pull requests•Updated Apr 8, 2026Apr 8, 2026

• sciencebeam-alignment

  Public
  ScienceBeam Alignment utility project

  sciencebeam

  sciencebeam

  Python

  •

  MIT License

  •00 forks•00 stars•00 issues•11 pull request•Updated Mar 30, 2026Mar 30, 2026

• flax

  Public
  kotahi

  kotahi

  JavaScript

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 17, 2026Mar 17, 2026

• sciencebeam-usage-examples

  Public
  Usage examples for ScienceBeam

  sciencebeam

  sciencebeam

  Jupyter Notebook

  •

  MIT License

  •00 forks•00 stars•00 issues•66 pull requests•Updated Feb 20, 2026Feb 20, 2026

• sciencebeam-datasets

  Public

  eLifePathways/sciencebeam-datasets’s past year of commit activity
  sciencebeam

  sciencebeam

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 19, 2026Feb 19, 2026

• sciencebeam-texture

  Public archive
  sciencebeam

  sciencebeam

  Shell

  •

  MIT License

  •22 forks•00 stars•00 issues•44 pull requests•Updated Feb 19, 2026Feb 19, 2026

• sciencebeam-airflow

  Public archive
  Airflow pipeline for ScienceBeam related training and evaluation

  sciencebeam

  sciencebeam

  Python

  •

  MIT License

  •00 forks•55 stars•00 issues•00 pull requests•Updated Feb 19, 2026Feb 19, 2026

• sciencebeam-charts

  Public
  ScienceBeam Helm Charts

  sciencebeam

  sciencebeam

  Mustache

  •

  MIT License

  •11 fork•00 stars•00 issues•00 pull requests•Updated Feb 19, 2026Feb 19, 2026

• sciencebeam-editor

  Public
  sciencebeam

  sciencebeam

  JavaScript

  •00 forks•11 star•00 issues•00 pull requests•Updated Feb 19, 2026Feb 19, 2026

• sciencebeam-grobid-biorxiv

  Public archive

  eLifePathways/sciencebeam-grobid-biorxiv’s past year of commit activity
  GROBID optimized for bioRxiv

  sciencebeam

  sciencebeam

  Dockerfile

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 19, 2026Feb 19, 2026

• sciencebeam-models

  Public
  Store ScienceBeam related models and embeddings

  sciencebeam

  sciencebeam

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 19, 2026Feb 19, 2026

• sciencebeam-gym

  Public archive
  ScienceBeam Gym

  sciencebeam

  sciencebeam

  Python

  •

  MIT License

  •44 forks•2525 stars•00 issues•00 pull requests•Updated Feb 19, 2026Feb 19, 2026

• sciencebeam-pipelines

  Public
  A set of tools to allow PDF to XML conversion, utilising Apache Beam and other tools. The aim of this project is to bring multiple tools together to generate a …

  grobidsciencebeam

  grobidsciencebeam

  Python

  •

  MIT License

  •00 forks•22 stars•00 issues•1010 pull requests•Updated Feb 19, 2026Feb 19, 2026

• kotahi-landing-page

  Public
  kotahi

  kotahi

  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 19, 2026Feb 19, 2026

• passport-orcid

  Public

  eLifePathways/passport-orcid’s past year of commit activity
  kotahi

  kotahi

  JavaScript

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 18, 2026Feb 18, 2026

• import-from-docmap

  Public
  kotahi

  kotahi

  JavaScript

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 16, 2026Feb 16, 2026

• kotahi-flax-templates

  Public

  eLifePathways/kotahi-flax-templates’s past year of commit activity
  kotahi

  kotahi

  Nunjucks

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 16, 2026Feb 16, 2026

• batcom

  Public

  eLifePathways/batcom’s past year of commit activity
  kotahi

  kotahi

  TypeScript

  •

  Other

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 16, 2026Feb 16, 2026

• wordpress-kotahi-importer

  Public

  eLifePathways/wordpress-kotahi-importer’s past year of commit activity
  kotahi

  kotahi

  PHP

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 16, 2026Feb 16, 2026

• curated-papers

  Public
  experimentvibe-coded

  experimentvibe-coded

  TypeScript

  •00 forks•00 stars•00 issues•00 pull requests•Updated Dec 18, 2025Dec 18, 2025

• aperio

  Public

  eLifePathways/aperio’s past year of commit activity
  experimentvibe-coded

  experimentvibe-coded

  TypeScript

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 8, 2025Nov 8, 2025

• sciencebeam-texture-formula

  Public archive

  eLifePathways/sciencebeam-texture-formula’s past year of commit activity
  SaltStack

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 29, 2020May 29, 2020

• sciencebeam-orchester

  Public archive
  Orchestrate ScienceBeam tasks for multiple datasets and tools (mostly for evaluation purpose)

  sciencebeam

  sciencebeam

  Shell

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 15, 2019Apr 15, 2019