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@gem-pasteur Microbial Evolutionary Genomics

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    5 repositories

    • macsylib

      Public
      Python library that help to detect of macromolecular, systems genetic pathways… in prokaryotes protein datasets
      Python
      •
      GNU General Public License v3.0
      •0•0•1•0•Updated Feb 12, 2026Feb 12, 2026

    • macsyfinder

      Public
      MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.
      Python
      •
      GNU General Public License v3.0
      •16•74•5•0•Updated Dec 22, 2025Dec 22, 2025

    • Integron_Finder

      Public
      Bioinformatics tool to find integrons in bacterial genomes
      bioinformaticsidentificationbacterial-genomes
      bioinformaticsidentificationbacterial-genomes
      F*
      •
      GNU General Public License v3.0
      •27•87•6•1•Updated May 7, 2025May 7, 2025

    • PanACoTA

      Public
      PANgenome with Annotations, COre identification, Tree and corresponding Alignments
      Python
      •
      GNU Affero General Public License v3.0
      •8•81•7•0•Updated Sep 20, 2023Sep 20, 2023

    • macsyview

      Public
      MacSyView - A web app for visualization of MacSyFinder's results.
      JavaScript
      •4•0•1•1•Updated Jan 18, 2018Jan 18, 2018
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