Repositories list

• bnbc

  Public
  R

  •00 forks•22 stars•33 issues•00 pull requests•Updated Apr 26, 2026Apr 26, 2026

• teach_rnaseq_boukas2021

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  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 12, 2026Feb 12, 2026

• bsseq

  Public
  Devel repository for bsseq

  R

  •2929 forks•3838 stars•6565 issues•66 pull requests•Updated Feb 6, 2026Feb 6, 2026

• hansenlab.github.io

  Public
  GitHub Pages

  CSS

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 6, 2026Feb 6, 2026

• recount_genotype_paper

  Public
  R

  •11 fork•22 stars•00 issues•00 pull requests•Updated Apr 24, 2025Apr 24, 2025

• mNSF

  Public
  Python

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  GNU Lesser General Public License v3.0

  •11 fork•66 stars•33 issues•00 pull requests•Updated Apr 14, 2025Apr 14, 2025

• epigeneticmachinery

  Public
  HTML

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  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 22, 2025Feb 22, 2025

• mNSF_paper

  Public
  Analysis for the mNSF paper

  Python

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  GNU Lesser General Public License v3.0

  •00 forks•22 stars•00 issues•11 pull request•Updated Nov 22, 2024Nov 22, 2024

• mpra

  Public
  R

  •55 forks•66 stars•11 issue•11 pull request•Updated Sep 14, 2024Sep 14, 2024

• minfi

  Public
  Devel repository for minfi

  R

  •7575 forks•6464 stars•125125 issues•88 pull requests•Updated Apr 30, 2024Apr 30, 2024

• fahrner_kabuki2

  Public
  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 8, 2024Apr 8, 2024

• mdem_neuron_paper

  Public
  Code for analyses in the paper

  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 6, 2024Apr 6, 2024

• yamss

  Public
  R

  •00 forks•33 stars•22 issues•00 pull requests•Updated Feb 29, 2024Feb 29, 2024

• RecountGenotyper

  Public
  Genotype calling from Recount3 RNA-seq data.

  R

  •

  Other

  •00 forks•11 star•33 issues•00 pull requests•Updated Jan 23, 2024Jan 23, 2024

• epigenetics_selection

  Public
  R

  •00 forks•11 star•00 issues•00 pull requests•Updated Oct 8, 2023Oct 8, 2023

• RNAVelocityCode

  Public
  Jupyter Notebook

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  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Aug 30, 2023Aug 30, 2023

• hansenlab

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Jul 16, 2023Jul 16, 2023

• fahrner_weaver

  Public
  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 24, 2023Jun 24, 2023

• IlluminaHumanMethylationEPIC2anno.ilm10a1.hg38

  Public
  00 forks•22 stars•00 issues•00 pull requests•Updated Apr 7, 2023Apr 7, 2023

• IlluminaHumanMethylationEPIC2manifest

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Apr 7, 2023Apr 7, 2023

• IlluminaHumanMethylationAllergymanifest

  Public
  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 1, 2023Mar 1, 2023

• IlluminaHumanMethylationAllergyanno.ilm12b3.hg19

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Mar 1, 2023Mar 1, 2023

• IlluminaHumanMethylationAllergyanno.ilm12.hg19

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Sep 15, 2022Sep 15, 2022

• tricycle

  Public
  R

  •88 forks•3131 stars•1313 issues•00 pull requests•Updated Mar 18, 2022Mar 18, 2022

• tricycle_paper_figs

  Public
  R

  •00 forks•00 stars•11 issue•00 pull requests•Updated Jan 6, 2022Jan 6, 2022

• spqn_paper

  Public
  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated Dec 20, 2021Dec 20, 2021

• IlluminaHumanMethylationAllergyanno.ilm10.hg19

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Aug 10, 2021Aug 10, 2021

• seurat-wrappers

  Public
  Community-provided extensions to Seurat

  R

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  GNU General Public License v3.0

  •146146 forks•00 stars•00 issues•00 pull requests•Updated Jun 28, 2021Jun 28, 2021

• IlluminaHumanMethylationEPICanno.ilm10b2.hg19

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Jun 18, 2021Jun 18, 2021

• IlluminaHumanMethylationEPICanno.ilm10b4.hg19

  Public
  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 18, 2021Jun 18, 2021