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@leelabsg Lee lab at SNU Graduate School of Data Science

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    20 repositories

    • GCDA_2026_Spring

      Public
      1•0•0•0•Updated Apr 15, 2026Apr 15, 2026

    • pathweb

      Public
      Python
      •1•0•0•0•Updated Mar 8, 2026Mar 8, 2026

    • GCDA_tutorial_2025_Fall

      Public template
      GCDA tutorial repo for 2025 Fall
      Jupyter Notebook
      •6•2•0•0•Updated Mar 3, 2026Mar 3, 2026

    • META_SAIGE

      Public
      Meta-analysis of Rare Variants in Biobank Data
      R
      •1•5•4•1•Updated Dec 10, 2025Dec 10, 2025

    • MetaSAIGE_code

      Public
      Pipelines for analyses in Meta-SAIGE paper
      Jupyter Notebook
      •2•1•0•0•Updated Oct 8, 2025Oct 8, 2025

    • KOGO_OpenAI_API_Tutorial_2025

      Public
      Jupyter Notebook
      •7•2•0•0•Updated Sep 26, 2025Sep 26, 2025

    • SKAT

      Public
      Sequence kernel association test (SKAT)
      sequence
      sequence
      R
      •16•54•10•3•Updated Aug 7, 2025Aug 7, 2025

    • GCDA_Tutorial_2025

      Public
      6•2•0•1•Updated May 8, 2025May 8, 2025

    • GCDA_Tutorial_2024

      Public
      6•1•0•1•Updated May 8, 2025May 8, 2025

    • MetaSKAT

      Public
      Meta-analysis of rare variants
      R
      •1•3•2•0•Updated Oct 8, 2024Oct 8, 2024

    • cCRE-site-ukbb

      Public
      pheweb like site for cCRE results
      JavaScript
      •0•0•0•0•Updated May 31, 2024May 31, 2024

    • SAIGE

      Public
      Development for SAIGE and SAIGE-GENE(+)
      C++
      •
      GNU General Public License v3.0
      •39•1•0•0•Updated Mar 8, 2024Mar 8, 2024

    • GCDA_Tutorial

      Public
      Jupyter Notebook
      •1•1•0•0•Updated Jun 7, 2023Jun 7, 2023

    • OAPRS

      Public
      Package for sample Overlap adjustment in PRS
      R
      •
      Other
      •0•1•1•0•Updated May 26, 2023May 26, 2023

    • SNUBH_deid

      Public
      De-identifying PHI in clinical notes from Dept.Raiology, SNUBH
      Python
      •1•0•0•0•Updated Mar 9, 2023Mar 9, 2023

    • overlapGWAS

      Public
      A Method to Exclude Overlapping Samples from GWAS Summary Statistics
      R
      •0•0•0•0•Updated Nov 2, 2022Nov 2, 2022

    • KOGOworkshop

      Public
      R
      •12•3•0•2•Updated Jul 26, 2022Jul 26, 2022

    • Multi-ethnic-PRS

      Public
      Develop the linear and Bayesian method to combine PRS from different ancestries.
      R
      •1•0•0•0•Updated Nov 3, 2021Nov 3, 2021

    • genes-site-ukbb200K

      Public
      JavaScript
      •1•0•0•0•Updated Sep 1, 2021Sep 1, 2021

    • SPAtest

      Public
      Score Test Based on Saddlepoint Approximation
      R
      •3•0•0•0•Updated Nov 1, 2020Nov 1, 2020
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