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@stringology-prague Stringology @ Prague

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    5 repositories

    • eds_search

      Public
      Search algorithms: BNDM, Shift-And; for EDS files.
      C
      •0•0•0•0•Updated Oct 13, 2021Oct 13, 2021

    • vcf2eds

      Public
      Tool for converting reference sequence and VCF files to single Elastic Degenerate String
      C++
      •1•0•0•0•Updated Oct 9, 2021Oct 9, 2021

    • gfa2reds

      Public
      Java
      •0•0•0•0•Updated Mar 12, 2020Mar 12, 2020

    • parallel-eds-search

      Public
      Parallel Search Tools for Elastic Degenerate Strings
      C++
      •
      MIT License
      •0•0•0•0•Updated Jan 16, 2020Jan 16, 2020

    • vcflib

      Public
      a simple C++ library for parsing and manipulating VCF files, + many command-line utilities
      C++
      •
      MIT License
      •222•0•0•0•Updated Apr 24, 2019Apr 24, 2019
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