closes

[ValWood]

fix for namespace

[github-actions]

Changes added to the edit file this PR

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Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/fypo.owl
• Version IRI: None
• Loaded from: file:/__w/fypo/fypo/master/src/ontology/fypo-edit.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/fypo.owl
• Version IRI: None
• Loaded from: file:/__w/fypo/fypo/src/ontology/fypo-edit.owl

Ontology imports

Ontology annotations

abnormal tRNA modification at postion A37 http://purl.obolibrary.org/obo/FYPO_0008450

Added

• abnormal tRNA modification at postion A37 has_obo_namespace "fission_yeast_phenotype"

abnormal tRNA modification at postion A58 http://purl.obolibrary.org/obo/FYPO_0008451

Added

• abnormal tRNA modification at postion A58 has_obo_namespace "fission_yeast_phenotype"

abnormal tRNA modification at postion U34 http://purl.obolibrary.org/obo/FYPO_0008449

Added

• abnormal tRNA modification at postion U34 has_obo_namespace "fission_yeast_phenotype"

abnormal tRNA modification at postion U46 http://purl.obolibrary.org/obo/FYPO_0008452

Added

• abnormal tRNA modification at postion U46 has_obo_namespace "fission_yeast_phenotype"

abolished Golgi cisternae stacking http://purl.obolibrary.org/obo/FYPO_0008453

Added

• abolished Golgi cisternae stacking has_obo_namespace "fission_yeast_phenotype"

decreased chromatin silencing at ectopic tethering site http://purl.obolibrary.org/obo/FYPO_0008454

Added

• decreased chromatin silencing at ectopic tethering site has_obo_namespace "fission_yeast_phenotype"

decreased plasma membrane hypoosmotic expansion during vegetative growth http://purl.obolibrary.org/obo/FYPO_0008455

Added

• decreased plasma membrane hypoosmotic expansion during vegetative growth has_obo_namespace "fission_yeast_phenotype"

normal nucleosome occupancy at long terminal repeat region http://purl.obolibrary.org/obo/FYPO_0008457

Added

• normal nucleosome occupancy at long terminal repeat region has_obo_namespace "fission_yeast_phenotype"

normal plasma membrane hypoosmotic expansion during vegetative growth http://purl.obolibrary.org/obo/FYPO_0008456

Added

• normal plasma membrane hypoosmotic expansion during vegetative growth has_obo_namespace "fission_yeast_phenotype"

Changes to ontology after reasoner runs

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Coming soon

Errors reported

Level	Rule Name	Subject	Property	Value
WARN	missing_definition	output_of	definition	
WARN	missing_definition	preceded_by	definition	
WARN	missing_definition	precedes	definition	
WARN	missing_obsolete_label	DEPRECATED increased subtelomere-derived RNA level	rdfs:label	DEPRECATED increased subtelomere-derived RNA level
WARN	missing_obsolete_label	DEPRECATED increased protein localization to chromatin at centromere outer repeat	rdfs:label	DEPRECATED increased protein localization to chromatin at centromere outer repeat
INFO	lowercase_definition	has_output	definition	p has output c if either: p has direct output c or p has output input c. Implies that if p happens, c always ensues.
INFO	missing_superclass	phenotype	rdfs:subClassOf