Remove FYPO:0010048 - see #4802

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Changes added to the edit file this PR

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Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/fypo.owl
• Version IRI: None
• Loaded from: file:/__w/fypo/fypo/master/src/ontology/fypo-edit.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/fypo.owl
• Version IRI: None
• Loaded from: file:/__w/fypo/fypo/src/ontology/fypo-edit.owl

Ontology imports

Ontology annotations

increased silent mating-type cassette transcript-derived RNA level http://purl.obolibrary.org/obo/FYPO_0010048

Removed

• Class: increased silent mating-type cassette transcript-derived RNA level

• increased silent mating-type cassette transcript-derived RNA level created_by "PomBase:pc"

• increased silent mating-type cassette transcript-derived RNA level creation_date "2026-04-01T08:16:57Z"^^dateTime

• increased silent mating-type cassette transcript-derived RNA level has_exact_synonym "increased cenH-derived RNA level"

• increased silent mating-type cassette transcript-derived RNA level definition "A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from cenH measured in a cell is higher than normal. cenH is a region located between mat2-P and mat3-M that is homologous to centromeric repeats, and that produces non-coding RNAs and small interfering RNAs."

  • database_cross_reference "PMID:40923761"

  • database_cross_reference "PomBase:pc"

• increased silent mating-type cassette transcript-derived RNA level label "increased silent mating-type cassette transcript-derived RNA level"@en

• increased silent mating-type cassette transcript-derived RNA level SubClassOf increased RNA level during vegetative growth

Changes to ontology after reasoner runs

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Coming soon

Errors reported

Level	Rule Name	Subject	Property	Value
WARN	missing_definition	output_of	definition	
WARN	missing_definition	preceded_by	definition	
WARN	missing_definition	precedes	definition	
WARN	missing_obsolete_label	DEPRECATED increased subtelomere-derived RNA level	rdfs:label	DEPRECATED increased subtelomere-derived RNA level
WARN	missing_obsolete_label	DEPRECATED increased protein localization to chromatin at centromere outer repeat	rdfs:label	DEPRECATED increased protein localization to chromatin at centromere outer repeat
INFO	lowercase_definition	has_output	definition	p has output c if either: p has direct output c or p has output input c. Implies that if p happens, c always ensues.
INFO	missing_superclass	phenotype	rdfs:subClassOf