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Clarifying "distance" and "inside distance"

Status: Open.

#32 In rafalab/bumphunter;

· dsimps1993 opened on May 10, 2024

Request to Replace Sweave Vignettes with R Markdown

Status: Open.

#31 In rafalab/bumphunter;

· sonali8434 opened on Jul 26, 2023

Why the bumphunter function gives the output with identical start and end genomic regions from the dataset?

Status: Open.

#28 In rafalab/bumphunter;

· JEBUNNAHAR opened on May 18, 2020

regionFinder not sorting positions

Status: Open.

#27 In rafalab/bumphunter;

· kperzel opened on Feb 6, 2020

genes() not found -- namespace issue

Status: Open.

#25 In rafalab/bumphunter;

· lcolladotor opened on Oct 3, 2019

unclear how "covers" is defined

Status: Open.

#22 In rafalab/bumphunter;

· ShanEllis opened on Oct 4, 2017

problem with GenomicRanges::nearest in annotateNearest

Status: Open.

#20 In rafalab/bumphunter;

· sampoll opened on Sep 14, 2017

Port 1.17.2 (bioc-devel) to bioc-release

Status: Open.

#19 In rafalab/bumphunter;

· lcolladotor opened on Aug 30, 2017

bumphunter(): "Error in nulltabs[[i]] " depending on the number of bootstrap replicates

Status: Open.

#18 In rafalab/bumphunter;

· mtellezp opened on Aug 24, 2017

Error in matchGenes when selecting subject index?

Status: Open.

#14 In rafalab/bumphunter;

· JonBarenboim opened on Mar 8, 2017

How to choose the minInSpan argument of locfitByCluster?

Status: Open.

#10 In rafalab/bumphunter;

· lcolladotor opened on Apr 28, 2016

Documentation - Appropriate Normalization

Status: Open.

#6 In rafalab/bumphunter;

· mehrankr opened on Nov 2, 2015