Issues

• improve readQFeatures with extra features

  rformassspectrometry/QFeatures#264 · Filter by author leopoldguyot opened on Aug 12, 2026
  1

• Add a wrapper for applying SE/SCE functions to QFeatures sets

  enhancement
  rformassspectrometry/QFeatures#261 · Filter by author leopoldguyot opened on May 13, 2026
  1

• Function names: need to rename 'assay' to 'set'

  rformassspectrometry/QFeatures#257 · Filter by author lgatto opened on Apr 1, 2026
  1

  

• Missing Ms1.Area column causes error in readQFeaturesFromDIANN()

  rformassspectrometry/QFeatures#256 · Filter by author annasen opened on Mar 5, 2026
  3

• Recommended Structure for Data Transformations (log/norm/impute) in QFeatures

  rformassspectrometry/QFeatures#252 · Filter by author baynec2 opened on Dec 5, 2025
  2

• plot QFeatures allow changing style

  rformassspectrometry/QFeatures#248 · Filter by author ococrook opened on Jun 25, 2025
  1

• Aggregating features when a value of fcol is "" (empty character)

  rformassspectrometry/QFeatures#246 · Filter by author cvanderaa opened on Jun 4, 2025
  

• Link to joinAssay()

  rformassspectrometry/QFeatures#244 · Filter by author lgatto opened on May 23, 2025

• Feature request: splitAssays()

  enhancement
  rformassspectrometry/QFeatures#240 · Filter by author lgatto opened on May 11, 2025

• Unique precursor identifiers

  rformassspectrometry/QFeatures#221 · Filter by author lgatto opened on Feb 7, 2025
  2

• runCol argument in readQFeatures()

  rformassspectrometry/QFeatures#216 · Filter by author samgregoire opened on Jul 29, 2024
  1

  

• QFeatures API

  rformassspectrometry/QFeatures#214 · Filter by author lgatto opened on May 13, 2024
  2

  

• Rethinking colData management when adding or extracting sets

  rformassspectrometry/QFeatures#212 · Filter by author cvanderaa opened on Apr 26, 2024
  3

• Streamline assay joining with joinAssays()

  rformassspectrometry/QFeatures#211 · Filter by author cvanderaa opened on Apr 24, 2024
  1

  

• Improve addAssayLink() documentation

  rformassspectrometry/QFeatures#209 · Filter by author cvanderaa opened on Apr 11, 2024
  

• .formatMtraqReportData() improvements

  rformassspectrometry/QFeatures#204 · Filter by author lgatto opened on Apr 8, 2024

• accessor for "sets/experiments" for easier piping

  rformassspectrometry/QFeatures#197 · Filter by author tavareshugo opened on Dec 13, 2023
  7

• longFormat for SE with rowvars

  rformassspectrometry/QFeatures#196 · Filter by author lgatto opened on Nov 30, 2023
  1

  

• All QFeatures functions should add assays?

  rformassspectrometry/QFeatures#193 · Filter by author cvanderaa opened on Sep 6, 2023
  7

• Improve sweep for multiple assays?

  rformassspectrometry/QFeatures#192 · Filter by author cvanderaa opened on Aug 25, 2023

• Feature: automatic identification/labelling of contaminant peptides

  rformassspectrometry/QFeatures#191 · Filter by author cvanderaa opened on Aug 25, 2023

• Refactor: QFeatures subsetting

  rformassspectrometry/QFeatures#186 · Filter by author cvanderaa opened on Apr 18, 2023
  1

  

• feature request: conditional filtering of missing values

  rformassspectrometry/QFeatures#182 · Filter by author KristinaGomoryova opened on Jan 15, 2023
  8

• feature request: filterNA() by column/sample

  rformassspectrometry/QFeatures#173 · Filter by author cvanderaa opened on Oct 4, 2022
  1

  

• feat: support an HDF5 backend for on-disk memory

  rformassspectrometry/QFeatures#171 · Filter by author cvanderaa opened on Sep 6, 2022
  1