Windows sleap: attr cattr incompatibility

envexp/environment.yml

@@ -1,10 +1,60 @@
 name: experiment
 channels:
+  - sleap-deps/label/dev
   - conda-forge
+  - nvidia
+  - sleap-deps
+  - sleap
+  - anaconda
 dependencies:
-  - python=3.10
-  - qtpy
-  - pyside6
-  - pip
+  # Packages SLEAP uses directly
+  - conda-forge::attrs >=23.1.0  # Corresponds to version of cattrs
+  # - conda-forge::cattrs ==1.1.1
+  - conda-forge::cattrs >=23.2.0
+  - conda-forge::jsmin
+  # - conda-forge::jsonpickle ==1.2
+  - conda-forge::jsonpickle <=1.5.0 # 1.5.1 breaks compatibility with v1 encoded files
+  - conda-forge::networkx
+  # - anaconda::numpy >=1.19.5,<1.23.0
+  - conda-forge::numpy >=1.16.5 # Scipy 1.7.0 requires numpy >=1.16.5
+  - conda-forge::opencv
+  # - conda-forge::h5py <=3.7.0
+  - conda-forge::h5py
+  - conda-forge::imageio
+  - conda-forge::imageio-ffmpeg
+  - conda-forge::pandas
+  - conda-forge::pip
+  - conda-forge::pillow #>=8.3.1,<=8.4.0
+  - conda-forge::psutil
+  - conda-forge::pykalman
+  # - conda-forge::pyside2 >=5.12  # To ensure application works correctly with QtPy.
+  - conda-forge::pyside6 >=6.5.0 # >=6.2 is compatible with Python 3.10, conda package exists for >=6.4, 6.4 conda package uses problematic QtCharts https://github.com/roomrys/envexp/pull/3
+  # - conda-forge::python ~=3.7    # Run into _MAX_WINDOWS_WORKERS not found if ==
+  - conda-forge::python >=3.10.0,<3.11.0 # Trying python 3.10
+  - conda-forge::python-rapidjson
+  - conda-forge::pyyaml
+  - conda-forge::pyzmq
+  - conda-forge::qtpy >=2.0.1
+  - conda-forge::rich
+  # - conda-forge::scipy >=1.4.1,<=1.9.0
+  - conda-forge::scipy >=1.7.0 # Python 3.10 is compatible with scipy >=1.7.0
+  - conda-forge::scikit-image
+  # - conda-forge::scikit-learn ==1.0
+  - conda-forge::scikit-learn >=1.0.0 # Python 3.10 is compatible with scikit-learn >=1.0.0
+  # - conda-forge::scikit-video
+  - conda-forge::seaborn
+  # - sleap/label/dev::tensorflow ==2.7.0  # TODO: Switch to main label when updated
+  - sleap-deps/label/dev::tensorflow ==2.9.2a0 # TODO: Switch to main label when updated
+  - conda-forge::tensorflow-hub  # Pinned in meta.yml, but no problems here... yet
+  - conda-forge::qudida
+  - conda-forge::albumentations
+  - conda-forge::ndx-pose
+
+  # Packages required by tensorflow to find/use GPUs
+  - conda-forge::cudatoolkit ==11.3.1
+  # "==" results in package not found
+  - conda-forge::cudnn=8.2.1
+  - nvidia::cuda-nvcc=11.3
   - pip:
+    - -r requirements.txt  # The conda_dev option requirements
     - -e . # Install the package in the current directory

envexp/requirements.txt

@@ -0,0 +1,44 @@
+# This file contains the minimal requirements to be installed via pip when using conda.
+
+# No conda packages for these
+# tensorflow-macos==2.9.2; sys_platform == 'darwin' and platform_machine == 'arm64' # 2.9.2 can only work up to Python 3.10
+# tensorflow-metal==0.5.0; sys_platform == 'darwin' and platform_machine == 'arm64'
+# tensorflow-hub==0.12.0; sys_platform == 'darwin' and platform_machine == 'arm64'
+imgstore<0.3.0  # 0.3.3 results in https://github.com/O365/python-o365/issues/591 which is from https://github.com/regebro/tzlocal/issues/112 when tzlocal is v3.0
+nixio>=1.5.3  # Constrain put on by @jgrewe from G-Node
+qimage2ndarray  # ==1.9.0
+segmentation-models
+
+pynwb>=2.3.3  # 2.0.0 required by ndx-pose, 2.3.3 fixes importlib-metadata incompatibility
+
+# This file contains the dependencies to be installed if in developer mode.
+
+pytest
+pytest-qt>=4.0.0
+pytest-cov<=3.0.0
+pytest-xvfb
+ipython
+sphinx
+# furo
+sphinx-book-theme
+sphinx-copybutton
+nbformat==5.1.3
+myst-nb
+myst-parser
+linkify-it-py
+sphinx-autobuild
+black==21.6b0
+pre-commit
+twine==3.3.0
+PyGithub
+jedi==0.17.2
+click==8.0.4
+
+# Attrs needs to match cattrs
+attrs >=23.1.0  # We use cattrs >=23.2.0 which requires attrs >=23.1.0
+
+# This file contains the dependencies to be installed for jupyter lab support. 
+
+ipykernel
+ipywidgets
+jupyterlab

envexp/user_test_code.py

@@ -1,19 +1,10 @@
 """User-defined test code to run after the imports have been tested."""
 
 if __name__ == "__main__":
-    assert False, "Replace this block with your own test code."
+
+    import os
 
-    # Example test code that is not run since after return
-    from qtpy.QtWidgets import QApplication, QMainWindow
+    from sleap import load_file
 
-    def create_app():
-        """Creates Qt application."""
-        app = QApplication([])
-        return app
-
-    app = create_app()
-
-    window = QMainWindow()
-    window.showMaximized()
-
-    app.exec_()
+    ds = os.environ["ds-dmc"]
+    load_file(ds)