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Fix chromosome labels in CSV files for >2 Gbp chromosomes which are cut

Status: Open.

#36 In sanger-tol/agp-tpf-utils;

· jgrg opened on Apr 9, 2026

list out of index for fragmented assembly

Status: Open.

#35 In sanger-tol/agp-tpf-utils;

· lcanesin opened on Mar 17, 2026

Install Issue - docker / singularity

Status: Open.

#33 In sanger-tol/agp-tpf-utils;

· LaurenHuet opened on Nov 18, 2025

Support adding additional unlocs in a second round map

Status: Open.

#32 In sanger-tol/agp-tpf-utils;

· klb1001 opened on Nov 4, 2025

Re-order position at which HAP2 tagged unpainted scaffolds are placed into HAP2 assembly

Status: Open.

#22 In sanger-tol/agp-tpf-utils;

· JoannaCollins opened on May 6, 2025

Add a suffix to regions broken off scaffolds which are then not included in painted scaffolds

Status: Open.

#21 In sanger-tol/agp-tpf-utils;

· JoannaCollins opened on May 6, 2025

Document output files

Status: Open.

#15 In sanger-tol/agp-tpf-utils;

· jgrg opened on Nov 18, 2024