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[release] Merge Develop into Master for 14.89.0#5566

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BenTopping merged 91 commits intomasterfrom
develop
Mar 9, 2026
Merged

[release] Merge Develop into Master for 14.89.0#5566
BenTopping merged 91 commits intomasterfrom
develop

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Proposed Changes

Instructions for Reviewers

  • Check stories are ready for release.
  • Check for any database migrations.
  • Check for debug code.
  • Check version is appropriate.

Everything above the horizontal rule will be overwritten on the next push
This PR was auto-generated on 2026-03-09T10:41:45+00:00

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wendyyang and others added 30 commits January 14, 2026 09:12
@wendyyang
add orange color
b54f2c5
@wendyyang
add validation of i7, i5 column
86cbf2e
@wendyyang
add unit test
cc016ff
@wendyyang
Merge branch 'develop' into 5291-y25-604---making-tag-columns-orange-…
c74bdc8 
…in-manifests
@wendyyang
add i7/i5 to the test fiile
6092baa
@wendyyang
update the test
772bc94
@wendyyang
fix linting
3a4574e
@wendyyang
fix the test
d6489dc
@wendyyang
Merge branch 'develop' into 5291-y25-604---making-tag-columns-orange-…
6fbcef5 
…in-manifests
@wendyyang
Merge branch 'develop' into 5291-y25-604---making-tag-columns-orange-…
3efdfc4 
…in-manifests
@wendyyang
add more columns to be orange
177f438
@BenTopping
wip: adds scrna core cdna pooling plan download link to submission sh…
9493c6f 
…ow page
@BenTopping
wip: initial attempt at fleshing out pooling plan logic
58f2ee8
@BenTopping
tests: adds pooling download tests
91d3780
@BenTopping
feat(submission): adds submission helper method to identify scrna cor…
1dd45b2 
…e pooling submissions
@BenTopping
feat(submission): correct scrna core pooling plan pool distribution l…
0f8b90a 
…ogic
@BenTopping
refactor: clean up pool allocation logic
e81cf1e
@BenTopping
feat(submission): moves scrna core pooling plan csv file generation t…
bc60325 
…o separate module
@BenTopping
tests: adds generate_pooling_plan tests for ScrnaCoreCdnaPrepPoolingP…
b6df3bd 
…lanGenerator
@BenTopping
fix: changes ScrnaCoreCdnaPrepPoolingPlanGenerator to group submissio…
f0e3bad 
…n data by request study/project instead of asset aliquot
@BenTopping
Merge branch 'develop' of https://github.com/sanger/sequencescape int…
ffc80ce 
…o Y25-016-scrna-submission-pooling-plan
@BenTopping
fix: adds asset uniqueness logic to ScrnaCoreCdnaPrepPoolingPlanGener…
fc5e0a6 
…ator grouped_requests
@BenTopping
fix: fixes multiplexed_library_tube throwing errors if no creation_re…
587e9eb 
…quests exist
@BenTopping
Merge branch 'develop' of https://github.com/sanger/sequencescape int…
b4ab11b 
…o Y25-016-scrna-submission-pooling-plan
@wendyyang
Merge branch 'develop' into 5291-y25-604---making-tag-columns-orange-…
dc27bf9 
…in-manifests
@wendyyang
save working version
9ac5b15
@BenTopping
refactor: removes cnda term from scrna core pooling plan to avoid con…
42b8ad1 
…fusion
@depfu
Update Node.js to version 24.13.1
5383dab
@StephenHulme
feat: add built-in rails endpoint
87217c0
@StephenHulme
refactor: order and group routes
87ee016
BenTopping and others added 22 commits February 26, 2026 12:54
@BenTopping
Merge branch 'develop' into Y25-016-scrna-submission-pooling-plan
6429211
@BenTopping
Merge pull request #5525 from sanger/Y25-016-scrna-submission-pooling…
8893a36 
…-plan

Y25-016-scrna-submission-pooling-plan
@depfu
Update selenium-webdriver to version 4.41.0
c7eaab4
@StephenHulme
Merge pull request #5571 from sanger/depfu/update/selenium-webdriver-…
7abb2b2 
…4.41.0

[ruby] Update selenium-webdriver 4.40.0 → 4.41.0 (minor)
@depfu
Update bootsnap to version 1.23.0
34defdd
@wendyyang
rename the updated config files
b2048af
@wendyyang
Merge branch 'develop' into Y26-004--lcm-triomics-add_RNAseq_template
3ed2d8e
@wendyyang
Merge branch 'develop' into 5291-y25-604---making-tag-columns-orange-…
8279684 
…in-manifests
@StephenHulme
Merge pull request #5579 from sanger/depfu/update/bootsnap-1.23.0
852747a 
[ruby] Update bootsnap 1.22.0 → 1.23.0 (minor)
@wendyyang
move the new code into separte files
78f3a63
@wendyyang
update the file
556b078
@wendyyang
reverse existing config
2345a13
@wendyyang
Merge branch 'develop' into Y26-004--lcm-triomics-add_RNAseq_template
98e2d35
@wendyyang
Merge pull request #5559 from sanger/Y26-004--lcm-triomics-add_RNAseq…
a46dd6f 
…_template

add LCM Triomics RNASeq template
@StephenHulme
build: update datatables
59e1e3e
@StephenHulme
Merge pull request #5583 from sanger/sh51/update-datatables
a797b5b 
[js] Update datatables
@depfu
Update Node.js to version 24.14.0
a9c4ef3
@StephenHulme
Merge pull request #5585 from sanger/depfu/engine/yarn/nodejs-24.14.0
c3646da 
[js] Update Node.js 24.13.1 → 24.14.0
@depfu
Update flipper to version 1.4.0
fd0ca2b
@wendyyang
Merge branch 'develop' into 5291-y25-604---making-tag-columns-orange-…
c825545 
…in-manifests
@wendyyang
Merge pull request #5483 from sanger/5291-y25-604---making-tag-column…
0429a67 
…s-orange-in-manifests

5291 y25 604   making tag columns orange in manifests
@StephenHulme
Merge pull request #5589 from sanger/depfu/update/flipper-1.4.0
bd18995 
[ruby] Update flipper 1.3.6 → 1.4.0 (minor)
@BenTopping BenTopping marked this pull request as ready for review March 9, 2026 10:40
@github-actions github-actions bot changed the title [release] Merge Develop into Master for 14.88.0 [release] Merge Develop into Master for 14.89.0 Mar 9, 2026
@BenTopping BenTopping merged commit 2729780 into master Mar 9, 2026
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@wendyyang wendyyang wendyyang approved these changes

@StephenHulme StephenHulme StephenHulme approved these changes

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3 participants

@wendyyang @StephenHulme @BenTopping