Add related packages to README, update bib entries, remove cellrank.org references#1312
Merged
Marius1311 merged 9 commits intomainfrom Mar 9, 2026
Merged
Add related packages to README, update bib entries, remove cellrank.org references#1312Marius1311 merged 9 commits intomainfrom
Marius1311 merged 9 commits intomainfrom
Conversation
3b31436 to
52d6b5c
Compare
52d6b5c to
b9666c5
Compare
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Summary
Housekeeping PR with three changes:
1. Add "Related packages" section to README
Compact table listing 6 sibling packages (moscot, moslin, VeloVI, RegVelo, CellMapper, CellAnnotator) with links to docs and references. Notes scverse ecosystem membership.
2. Update references.bib
klein:23→klein:25): updated from bioRxiv preprint to published Nature 638, 1065–1075 (2025), with full 20-author list.lange:23→lange:24): updated from bioRxiv preprint to published Genome Biology 25 (2024).gayoso:24): Nature Methods 21, 50–59 (2024).wang:24): bioRxiv (2024).:cite:reference inRealTimeKernel.from_moscot()docstring.3. Remove outdated cellrank.org references
cellrank.orgURLs withcellrank.readthedocs.io/en/latest/.