I am trying to convert RDF to XML. In my xsparql query I would like to take input RDF file as a arg from command line.
My xsparql query
`prefix obo: http://purl.obolibrary.org/obo/
prefix sio: http://semanticscience.org/resource/
prefix xsd: http://www.w3.org/2001/XMLSchema#
prefix snomedct: http://purl.bioontology.org/ontology/SNOMEDCT/
prefix rdf: http://www.w3.org/1999/02/22-rdf-syntax-ns#
{
for $dob from $inputFile
where {
$output rdf:type sio:SIO_000340.
$output sio:SIO_000300 $dob.
$quality rdf:type obo:NCIT_C68615 .
$quality sio:SIO_000642 $output.
$person rdf:type sio:SIO_000498.
$person sio:SIO_000217 $quality .
}
return <ItemDataDateTime ItemOID="BRTHDTC">{$dob}</ItemDataDateTime>
}
`
My command line
java -jar xsparql-cli-jar-with-dependencies.jar xsparql/cde-dob-to-odm.xsparql inputFile="file:///home/rajaram/work/ejp-rd/cde-mappings/cde-to-odm/xsparql/cde-dob-sex.ttl" -f output.xml
I am trying to convert RDF to XML. In my xsparql query I would like to take input RDF file as a arg from command line.
My xsparql query
`prefix obo: http://purl.obolibrary.org/obo/
prefix sio: http://semanticscience.org/resource/
prefix xsd: http://www.w3.org/2001/XMLSchema#
prefix snomedct: http://purl.bioontology.org/ontology/SNOMEDCT/
prefix rdf: http://www.w3.org/1999/02/22-rdf-syntax-ns#
{
for $dob from $inputFile
where {
$output rdf:type sio:SIO_000340.
$output sio:SIO_000300 $dob.
}
`
My command line
java -jar xsparql-cli-jar-with-dependencies.jar xsparql/cde-dob-to-odm.xsparql inputFile="file:///home/rajaram/work/ejp-rd/cde-mappings/cde-to-odm/xsparql/cde-dob-sex.ttl" -f output.xml