Skip to content

How to parse RDF input file #37

Description

@rajaram5

I am trying to convert RDF to XML. In my xsparql query I would like to take input RDF file as a arg from command line.

My xsparql query

`prefix obo: http://purl.obolibrary.org/obo/
prefix sio: http://semanticscience.org/resource/
prefix xsd: http://www.w3.org/2001/XMLSchema#
prefix snomedct: http://purl.bioontology.org/ontology/SNOMEDCT/
prefix rdf: http://www.w3.org/1999/02/22-rdf-syntax-ns#
{
for $dob from $inputFile
where {
$output rdf:type sio:SIO_000340.
$output sio:SIO_000300 $dob.

     $quality rdf:type obo:NCIT_C68615 .
     $quality sio:SIO_000642  $output.

     $person rdf:type sio:SIO_000498. 
     $person sio:SIO_000217 $quality .
   }
   
   return <ItemDataDateTime ItemOID="BRTHDTC">{$dob}</ItemDataDateTime>  

}

`

My command line

java -jar xsparql-cli-jar-with-dependencies.jar xsparql/cde-dob-to-odm.xsparql inputFile="file:///home/rajaram/work/ejp-rd/cde-mappings/cde-to-odm/xsparql/cde-dob-sex.ttl" -f output.xml

Activity

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

      Milestone

      No milestone

      Relationships

      None yet

      Development

      No branches or pull requests

      Issue actions