Pinned Loading

1. PRDBv3_dataset PRDBv3_dataset Public

   Protein-RNA docking benchmark v3.0

   Jupyter Notebook 2

2. gmx_MMPBSA_dataParser gmx_MMPBSA_dataParser Public

   For the independent analysis of the different binding free energy files generated by the gmx_MMPBSA such as a CSV and DAT files.

   Jupyter Notebook

3. RBPs_RNA_conformers_lib RBPs_RNA_conformers_lib Public

   RNA backbone has six degrees of freedom and side-chain adopts different orientation these make RNA molecule more flexible compared to proteins.

4. RBPs_rotamer_lib RBPs_rotamer_lib Public

   Backbone dependent RNA binding proteins specfific rotamer library created for the resideus present at the interface, non-interface and overall surface residues.

5. RNAmodViz RNAmodViz Public

   RNAmodViz is a lightweight toolkit for the retrieval, parsing, visualization, and cataloging of modified RNA nucleotides from the Protein Data Bank (PDB) Chemical Component Dictionary (CCD).

   Jupyter Notebook