Issues

• multiple microbial names, causing duplicate barcode names

  sjdlabgroup/SAHMI#25 · Filter by author Patataishere opened on Nov 22, 2024
  1

• About the raw cell lines microbiome data ("cell.lines.txt" )

  sjdlabgroup/SAHMI#24 · Filter by author 2023xiaolan opened on Sep 11, 2024

• There was a complete mismatch between the barcodes of microbial counts and those of single cells

  sjdlabgroup/SAHMI#23 · Filter by author lxzzzzzzzzzzzzzzzzzzzz opened on Sep 3, 2024

• help with Wilcoxon testing?

  sjdlabgroup/SAHMI#22 · Filter by author bitcometz opened on Aug 21, 2024

• Is it normal that over 50% of the cells in my data contain microbiome?

  sjdlabgroup/SAHMI#21 · Filter by author INeedCNS opened on Jul 31, 2024

• Detailed SAHMI codes

  sjdlabgroup/SAHMI#20 · Filter by author duphiler opened on Jun 22, 2024

• run extract_microbiome_reads.r and Error in split.default(taxid, ceiling(seq_along(taxid)/opt$ntaxid))

  sjdlabgroup/SAHMI#19 · Filter by author sheyong111 opened on Apr 10, 2024
  1

• One logical error: some species exist both in cell.line.txt and sample files but are not specified

  sjdlabgroup/SAHMI#18 · Filter by author StackChan opened on Mar 31, 2024

• Bug

  sjdlabgroup/SAHMI#15 · Filter by author WenyuLiang opened on Nov 10, 2023

• A letter asking for help on SAHMI issues

  sjdlabgroup/SAHMI#13 · Filter by author CongjiaMa opened on Aug 12, 2023
  4

• errors when run the taxa_counts.r function

  sjdlabgroup/SAHMI#12 · Filter by author imMMQ opened on Jul 26, 2023
  7

• One erro for the last step taxa_counts.r

  sjdlabgroup/SAHMI#8 · Filter by author SkyStarStear opened on Jun 28, 2023
  1

• "cell.lines.txt" or "Table S4" don't include some taxas

  sjdlabgroup/SAHMI#7 · Filter by author ZhangMH2000 opened on Jun 3, 2023
  1

• Read1/Reads2 using in Kraken2Uniq

  sjdlabgroup/SAHMI#6 · Filter by author oyxf opened on Apr 23, 2023
  2