//This macro processes multiple images in a folder, outputting the number of bacteria pixels in the red channel and the green channel respectively to calculate the //viability of a biofilm stained with red and green viability stains. //It also saves overlay images showing the bacteria which have been detected. //See "Supplementary Information" file for details on how to run and implement the macro.
//Created by Sophie Mountcastle (sem093@bham.ac.uk) and Nina Vyas (n.vyas@bham.ac.uk) //University of Birmingham, Edgbaston, B15 2TT, UK //For queries please contact Dr Sarah Kuehne (s.a.kuehne@bham.ac.uk)