Skip to content

Strain filtering#24

Merged
StevenCannon-USDA merged 4 commits intomasterfrom
strain-filtering
Dec 17, 2025
Merged

Strain filtering#24
StevenCannon-USDA merged 4 commits intomasterfrom
strain-filtering

Conversation

@That-Thing
Copy link
Copy Markdown
Contributor

Adds filtering by samples to the /vcf/fetch endpoint.
Samples can be given to the api with the ?samples url query parameter (e.g ?samples=PI86046?samples=PI90208?samples=PI219698)

@matthewwiese
Copy link
Copy Markdown

Hi Simon! I looked over the PR. Before the govt shutdown we had discussed here that I had implemented this in our microservices already (finish_fasta_api branch)

My only suggestion is to rename the /strains endpoint to /vcf/samples for consistency with our version.

cc @ctcncgr

@That-Thing
Copy link
Copy Markdown
Contributor Author

My only suggestion is to rename the /strains endpoint to /vcf/samples for consistency with our version.

Done

Copy link
Copy Markdown
Contributor

@StevenCannon-USDA StevenCannon-USDA left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Given the review from @matthewwiese, I am going to approve and merge this branch.

@StevenCannon-USDA StevenCannon-USDA merged commit 1ec6786 into master Dec 17, 2025
1 check passed
@StevenCannon-USDA StevenCannon-USDA deleted the strain-filtering branch December 17, 2025 14:44
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

3 participants