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R		R
data		data
docs		docs
inst		inst
man		man
src		src
tests		tests
vignettes		vignettes
.Rbuildignore		.Rbuildignore
.gitignore		.gitignore
DESCRIPTION		DESCRIPTION
LICENSE		LICENSE
NAMESPACE		NAMESPACE
NEWS.md		NEWS.md
README.md		README.md
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scMatchmaker

Cell-Cell Interaction and Ligand-Receptor Discovery in Single Cell RNA Sequencing using Earth Mover's Distance.

Installation

scMatchmaker v0.99.0

install.packages("devtools")
devtools::install_github("stevexniu/scMatchmaker")

Usage

See tutorial in vignettes/example.Rmd or scMatchmaker Reference and Get Started

© X. Steve Niu from Landau Lab

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Cell-Cell Interaction Discovery in Single Cell RNA Sequencing

stevexniu.github.io/scMatchmaker/

ligand-receptor rna-seq rstats single-cell

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