suda-huanglab
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circlehunter
circlehunter PublicA pipeline for identifying complex ecDNA using ATAC-Seq data.
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scCirclehunter
scCirclehunter PublicA workflow for identifying ecDNA from scATAC-seq and assigning it to cell populations.
Cython 1
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ecMMT-Score
ecMMT-Score PublicA workflow for quantifying ecDNA-driven mitochondrial hijacking from macrophages via in silico purification and microenvironment de-noising.
R
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ecPerturb-Morph
ecPerturb-Morph PublicA computational pipeline for predicting the impact of gene/antigen/drug perturbations on single-cell states.
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Repositories
- ecMMT-Score Public
A workflow for quantifying ecDNA-driven mitochondrial hijacking from macrophages via in silico purification and microenvironment de-noising.
suda-huanglab/ecMMT-Score’s past year of commit activity - ecPerturb-Morph Public
A computational pipeline for predicting the impact of gene/antigen/drug perturbations on single-cell states.
suda-huanglab/ecPerturb-Morph’s past year of commit activity - scCirclehunter Public
A workflow for identifying ecDNA from scATAC-seq and assigning it to cell populations.
suda-huanglab/scCirclehunter’s past year of commit activity
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