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@tatonetti-lab

Tatonetti Lab

Popular repositories Loading

  1. onsides onsides Public

    A resource of adverse drug effects extracted from FDA structured product labels

    Python 86 8

  2. tcga-path-reports tcga-path-reports Public

    TCGA Pathology Reports in Machine Readable Text

    Python 58 8

  3. nsides-release nsides-release Public

    Analysis notebooks and database interaction scripts for the nsides project

    Jupyter Notebook 19 9

  4. tnm-stage-classifier tnm-stage-classifier Public

    Extract TNM cancer staging from pathology notes.

    Jupyter Notebook 11 10

  5. h2o h2o Public

    Observational Heritability

    Jupyter Notebook 10 2

  6. riftehr riftehr Public

    RIFTEHR

    TSQL 9 6

Repositories

Showing 10 of 47 repositories
  • Accent-Project Public

    Assessing the effect of accent in transcription accuracy of ASR models.

    tatonetti-lab/Accent-Project’s past year of commit activity
    Python 0 0 0 0 Updated Dec 16, 2025
  • offsides Public

    A resource for drug side effects associations not listed on the official labels

    tatonetti-lab/offsides’s past year of commit activity
    Jupyter Notebook 1 MIT 1 1 0 Updated Nov 25, 2025
  • tatonetti-lab.github.io Public

    Tatonetti Lab Website

    tatonetti-lab/tatonetti-lab.github.io’s past year of commit activity
    HTML 0 0 0 0 Updated Oct 28, 2025
  • onsides-web Public

    OnSIDES Website

    tatonetti-lab/onsides-web’s past year of commit activity
    JavaScript 1 MIT 0 1 1 Updated Oct 20, 2025
  • PedXBench Public
    tatonetti-lab/PedXBench’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Sep 25, 2025
  • pingkit Public
    tatonetti-lab/pingkit’s past year of commit activity
    Python 1 MIT 1 0 0 Updated Sep 20, 2025
  • Mapping-LOY Public

    Analysis pipeline for mapping and quantifying Y chromosome read counts across WGS, WES, and RNA-seq data to study loss of the Y chromosome (LOY) in cancer and other contexts.

    tatonetti-lab/Mapping-LOY’s past year of commit activity
    R 0 0 0 0 Updated Sep 5, 2025
  • pressure_pad Public
    tatonetti-lab/pressure_pad’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Aug 1, 2025
  • singlecell-nephrotoxicity Public

    Repo for reproducing sc nephrotoxicity analysis

    tatonetti-lab/singlecell-nephrotoxicity’s past year of commit activity
    Python 0 0 0 0 Updated Jun 23, 2025
  • onsides Public

    A resource of adverse drug effects extracted from FDA structured product labels

    tatonetti-lab/onsides’s past year of commit activity
    Python 86 MIT 8 25 1 Updated Jun 20, 2025
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Most used topics

genetics gwas