PGCN: Disease gene prioritization by disease and gene embedding through GCN
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Apr 1, 2024 - Python
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disease-gene-association
Here are 10 public repositories matching this topic...
Generic human DNA variant annotation pipeline
docker workflow gene singularity vcf variants snv vep disease-gene-association indels annotation-tool vcfanno germline variant-annotations annotation-framework snvs
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Feb 13, 2024 - Python
Explore the cancer relevance of your gene list
cancer proteins disease-gene-association tcga-data crispr-target protein-protein-interaction co-expression report-generator prioritization genesets high-throughput-screening cancer-survival functional-enrichment-analysis pathway-enrichment-analysis protein-complexes tissue-enrichment-analysis cancer-hallmark-evidence
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Dec 17, 2025 - R
Processing the DisGeNET database of disease–gene association
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Mar 26, 2016 - Jupyter Notebook
Final Year Project Repository for correlating the personality trait with the diseases
personality-insights disease-gene-association cnn-keras genomic-data-analysis genomics-visualization cnn-classification
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Oct 2, 2018 - Python
HIT (Hypergraph Interaction Transformer) for therapeutic gene prediction (Authors' PyTorch Implementation).
disease-gene-association hypergraphs therapeutic-targets deep-representation-learning hypergraph-neural-networks biomarker-prediction
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Oct 18, 2025 - Python
This repository contains the Python code of the work done for the project of a course called "Learning from Networks" (Master Degree in Data Science).
python machine-learning deep-learning biology graphs sklearn pytorch networkx edge-prediction networks disease-gene-association node-embedding karateclubnetwork
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Jan 26, 2023 - Python
identifying and annotating uninvestigated disease-associated genes
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Jan 4, 2023 - HTML
A comprehensive bioinformatics pipeline for downloading and analyzing genes associated with specific phenotypes from multiple biological databases. This package provides both R scripts for gene retrieval and Python analysis tools for downstream analysis.
bioinformatics r genomics computational-biology gtex phenotypes uniprot opentargets kegg reactome disgenet disease-gene-association hpo omim gene-prioritization literature-mining string-db phenotype-to-gene
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Apr 28, 2026 - Python
Hidden Markov Random Field Model - Inferring Gene-Disease Association by an Integrative Analysis of eQTL GWAS and Protein-Protein Interaction data
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Mar 26, 2019 - R
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