QTL mapping pipeline (LOD scoring, peak identification) for Palomero et al., "Immune Cell Associations with Cancer Risk", iScience, 2020. Pairs with systematicBNR for pre-processing.
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Updated
Aug 2, 2026 - R
QTL mapping pipeline (LOD scoring, peak identification) for Palomero et al., "Immune Cell Associations with Cancer Risk", iScience, 2020. Pairs with systematicBNR for pre-processing.
Code repository for Pardo-Cea, Farré, Esteve, Palade, Espín, et al. "Biological basis of extensive pleiotropy between blood traits and cancer risk." Genome Medicine, 2024.
Predictive Radiomics for Evaluation of Cancer Immune SignaturE in Glioblastoma (PRECISE-GBM): An AI-based pipeline integrating MRI radiomics, genomics, and immune signatures for patient stratification.
Immune cell population analysis tool for estimating immune cell composition from gene expression data (DEGs or raw counts). Python CLI + web interface for deconvolution, visualization, and Circos plots.
Pipeline for regression analysis of immune/stromal cell quantitative trait loci linked to cancer risk. Developed for Palomero, Espín, et al., "Immune Cell Associations with Cancer Risk", iScience, 2020.
Free Android open-source app that tracks what your body is doing while fasting
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