mass-action-kinetics

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EmilioVenegas / mantis-delta

A Python library for Chemical Reaction Network Theory (CRNT) bridging network topology with symbolic mass-action kinetics and algebraic stability certification.

python numpy systems-biology scipy sympy symbolic-computation stochastic-simulation stability-analysis crnt chemical-reaction-network-theory mathematical-chemistry mass-action-kinetics

Updated Jun 24, 2026
Python

bshepp / chemical-reaction-network

Star

A detailed-balanced chemical reaction network realized as a gradient flow, where equilibrium propagation is rigorous — the chemistry computes its own weight update (verified: local update == true gradient). Audits 'who computes the update?' across a co-location spectrum vs an offline ceiling. Part of physical-learning-substrates.

scientific-computing gradient-flow energy-based-model chemical-reaction-network equilibrium-propagation physical-learning mass-action-kinetics numpy-scipy deadman-publish

Updated Jun 24, 2026
Python

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