star-aligner
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Automated RNA-seq reference builder for STAR and Salmon. Features container-aware memory detection, automatic Ensembl/GENCODE downloads, and version-controlled index generation.
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Dec 23, 2025 - Shell
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Jun 24, 2021 - WDL
Differential gene expression analysis for samples with replicates using STAR-DeSeq2 pipeline
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Apr 6, 2024 - R
counting Insertion (I), deletion (D), splcing(N) events from CIGAR string in sam file generated by STAR aligner
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Apr 17, 2021 - Perl
Workflow for differential gene expression analysis for non-replicate samples using DEGseq
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Feb 11, 2024 - R
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