ubiquitin

Here are 4 public repositories matching this topic...

n-szulc / lysine_deserts

Data accompanying the manuscript "Lysine-deficient proteome can be regulated through non-canonical ubiquitination and ubiquitin-independent proteasomal degradation" by Szulc et al., 2023.

ubiquitin ubiquitin-proteasome-system lysine-desert protein-turnover e3-ligase non-canonical-ubiquitination

Updated Nov 10, 2023
Jupyter Notebook

asifali-bio / caapha

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☕ CAAPHA — Cancer Abundance-Aware Proteomic Heatmap Atlas

bioinformatics heatmap computational-biology data-visualization proteomics cancer-research quantitative-proteomics dcaf protein-expression ubiquitin e3-ligase ligase molecular-glue crl4 ddb1 cul4

Updated Jul 2, 2026
R

eluckydog / ubsumo-elecomp

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electrostatic competition analysis of ubiquitin vs SUMO modification sites

computational-biology sumo protein-modification ubiquitin electrostatic-analysis

Updated May 17, 2026
Python

Ruqing1963 / kakutani-statistical-pharmacology-VIII

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Paper VIII of Statistical Pharmacology via Kakutani Dichotomy: validation on real PDB ensembles (ubiquitin NMR, adenylate kinase), Isserlis bound and influence-function block selection, bootstrap coverage calibration. Code, data, paper.

reproducible-research protein-data-bank adenylate-kinase influence-functions ledoit-wolf block-bootstrap elastic-network-models ubiquitin kakutani-dichotomy conformational-ensembles statistical-pharmacology nmr-ensembles isserlis-theorem coverage-calibration

Updated Sep 29, 2026
Python

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