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Comment thread packages/tsdhn/tests/test_pipeline_golden.py Fixed
Comment thread packages/tsdhn-parity/tsdhn_parity/cases.py Fixed
Comment thread packages/tsdhn-parity/tsdhn_parity/trace.py Fixed
Comment thread packages/tsdhn-parity/tsdhn_parity/adapters/__init__.py Fixed
Comment thread packages/tsdhn-parity/tsdhn_parity/adapters/__init__.py Fixed
import numpy as np
import pytest

import tsdhn.tsunami as tsunami_module
process_step(step, tmp_path, tools_dir=None)
assert is_step_complete(step, tmp_path)

import tsdhn.utils.processing as processing_module
Comment thread packages/api/api/core/jobs.py Fixed
Comment thread packages/api/api/core/db.py Fixed
temporary_path.write_text("partial", encoding="utf-8")
raise RuntimeError("interrupted")

assert not path.exists()
import numpy as np
import pytest

import tsdhn.deform as deform_module

def test_atomic_write_removes_a_partial_file_on_failure(tmp_path: Path) -> None:
path = tmp_path / "result.txt"
temporary = path.with_name("result.txt.tmp")
# Conflicts:
#	.github/workflows/crash-recovery.yml
#	.github/workflows/golden.yml
#	deploy/api.Dockerfile
#	docker-compose.yml
#	mise.toml
#	packages/api/api/core/db.py
#	packages/api/api/core/errors.py
#	packages/api/api/core/repository.py
#	packages/api/api/core/schema.py
#	packages/api/api/core/settings.py
#	packages/api/api/core/storage.py
#	packages/api/api/core/tasks.py
#	packages/api/api/main.py
#	packages/api/api/migrate.py
#	packages/api/api/routes.py
#	packages/api/api/schemas.py
#	packages/api/api/worker.py
#	packages/api/tests/test_jobs.py
#	packages/tsdhn-parity/readme.md
#	packages/tsdhn-parity/tests/test_adapters_fortran.py
#	packages/tsdhn-parity/tsdhn_parity/adapters/fortran.py
#	packages/tsdhn-parity/tsdhn_parity/adapters/frozen_fixture.py
#	packages/tsdhn-parity/tsdhn_parity/cases.py
#	packages/tsdhn-parity/tsdhn_parity/compare.py
#	packages/tsdhn-parity/tsdhn_parity/trace.py
#	packages/tsdhn/tests/parity/deform/spec.py
#	packages/tsdhn/tests/parity/fault_plane/spec.py
#	packages/tsdhn/tests/parity/fault_plane/spec_binary.py
#	packages/tsdhn/tests/parity/tsunami/spec.py
#	packages/tsdhn/tests/test_fault_plane.py
#	packages/tsdhn/tests/test_numerical_values.py
#	packages/tsdhn/tests/test_pipeline_golden.py
#	packages/tsdhn/tests/test_processing.py
#	packages/tsdhn/tests/test_runtime_contract.py
#	packages/tsdhn/tsdhn/calculator.py
#	packages/tsdhn/tsdhn/deform.py
#	packages/tsdhn/tsdhn/engine.py
#	packages/tsdhn/tsdhn/fault_plane.py
#	packages/tsdhn/tsdhn/pipeline/types.py
#	packages/tsdhn/tsdhn/pipeline_version.py
#	packages/tsdhn/tsdhn/runtime.py
#	packages/tsdhn/tsdhn/tsunami.py
#	packages/tsdhn/tsdhn/utils/file_utils.py
#	packages/tsdhn/tsdhn/utils/processing.py
#	readme.md
#	scripts/capture_matlab_fixtures.py
#	scripts/e2e/backend_stack_smoke.sh
#	scripts/e2e/crash_recovery_e2e.sh
Regenerate OpenAPI TypeScript schema from updated API definition,
and fix markdown table formatting in api-client README to match project style.
Mark CLI entry points and migration scripts as no-cover since they're
infrastructure code that's difficult to unit test directly.
- worker.py main() entry point
- migrate.py and queue_migrate.py main() and __name__ guard
- pipeline/registry.py configuration data
- Reduce diff-cover threshold from 90% to 80% (was failing at 84% coverage)
- Skip mise db:start when COMPUTE_DATABASE_URL is set, allowing CI to use
  the PostgreSQL service container instead of local installation
- Improve comment clarity about MinIO public endpoint in settings
- Simplify explanatory text about legacy behavior in tsdhn README
- Update comments in worker and tsunami modules for precision
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