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  1. Whole-genome_variantCalling Whole-genome_variantCalling Public

    Scalable pipeline for variant calling and quality filtering for short-read genomic sequences. This workflow follows the GATK Best Practices protocol and is implemented with a SLURM scheduler and ca…

    Shell 4 1

  2. FSJ_Blood_metagenomics FSJ_Blood_metagenomics Public

    Isolate and identify microbes within host whole-blood samples using the program Kraken2

    R

  3. mtmorgan/AlphaMissenseR mtmorgan/AlphaMissenseR Public

    Accessing AlphaMissense Data Resources in R

    R 13 3

  4. ProteinGymPy ProteinGymPy Public

    Forked from ccb-hms/ProteinGymPy

    Programmatic access to ProteinGym datasets in Python

    Python

  5. ProteinGymR ProteinGymR Public

    Forked from ccb-hms/ProteinGymR

    Programmatic access to ProteinGym datasets in R/Bioconductor

    R

  6. FSJ-WGS20x FSJ-WGS20x Public

    Scripts for Whole-genome sequencing across space and time reveals impact of population decline and reduced gene flow in Florida Scrub-Jays by Nguyen et al. 2026.

    R 1