Viewer / plot does not display anything

[jbdurand]

Hi,
I just tried AMAPVox 2.2.1, 1.0.1 and installation from sources. In the three cases, the example provided for plot does not display anything.

    vxsp <- readVoxelSpace(system.file("extdata", "tls_sample.vox", package = "AMAPVox"))
     # plot sampling intensity by default
     plot(vxsp)

Same behaviour when running from GUI

AMAPVox::run()

This is using ubuntu 24.04, R 4.5.1.

Thanks!

[philippeverley]

Salut JB,

Using Ubuntu 24.04 and R 4.5.2

R --vanilla
R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"

> install.packages('AMAPVox')
* DONE (AMAPVox)
> packageVersion('AMAPVox')
[1] ‘2.2.1’
> library(AMAPVox)
> vxsp <- readVoxelSpace(system.file("extdata", "tls_sample.vox", package = "AMAPVox"))
> plot(vxsp)

> AMAPVox::run()
Check for updates. Latest version available 2.4.1
trying URL 'https://forge.ird.fr/api/v4/projects/819/packages/generic/amapvox/2.4.1/AMAPVox-2.4.1-linux.zip'
Content type 'application/octet-stream' length 104685742 bytes (99.8 MB)
==================================================
downloaded 99.8 MB

AMAPVox 2.4.1 successfully installed in /home/pverley/.local/share/AMAPVox/bin/AMAPVox-2.4.1-linux
Running AMAPVox 2.4.1
'/home/pverley/.local/share/AMAPVox/bin/AMAPVox-2.4.1-linux/lib/runtime/bin/java' -Xms2048m --add-opens javafx.graphics/javafx.scene=ALL-UNNAMED -jar /home/pverley/.local/share/AMAPVox/bin/AMAPVox-2.4.1-linux/lib/app/AMAPVox-2.4.1.jar
...

You've got no error message ? Just nothing happens ?

[jbdurand]

    Hi, thanks for you reply. Yes, this is exactly as you wrote. Le 21/11/2025 à 11:20, Philippe Verley a écrit :

…

*philippeverley* left a comment (umr-amap/AMAPVox#12) <#12 (comment)> Salut JB, Using Ubuntu 24.04 and R 4.5.2 R --vanilla R version 4.5.2 (2025-10-31) --"[Not] Part in a Rumble" > install.packages('AMAPVox') * DONE (AMAPVox) > packageVersion('AMAPVox') [1] ‘2.2.1’ > library(AMAPVox) > vxsp <- readVoxelSpace(system.file("extdata","tls_sample.vox",package = "AMAPVox")) > plot(vxsp) amapvox-plot-tls-sample.png (view on web) <https://github.com/user-attachments/assets/efd90956-9ce7-43de-a449-d597073a7890> > AMAPVox::run() Check for updates. Latest version available 2.4.1 trying URL 'https://forge.ird.fr/api/v4/projects/819/packages/generic/amapvox/2.4.1/AMAPVox-2.4.1-linux.zip' Content type 'application/octet-stream' length 104685742 bytes (99.8 MB) ================================================== downloaded 99.8 MB AMAPVox 2.4.1 successfully installed in /home/pverley/.local/share/AMAPVox/bin/AMAPVox-2.4.1-linux Running AMAPVox 2.4.1 '/home/pverley/.local/share/AMAPVox/bin/AMAPVox-2.4.1-linux/lib/runtime/bin/java' -Xms2048m --add-opens javafx.graphics/javafx.scene=ALL-UNNAMED -jar /home/pverley/.local/share/AMAPVox/bin/AMAPVox-2.4.1-linux/lib/app/AMAPVox-2.4.1.jar ... You've got no error message ? Just nothing happens ? — Reply to this email directly, view it on GitHub <#12 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ADK2DZI3XQBZSVMDWCEAOVL353RPPAVCNFSM6AAAAACMWX3QSSVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZTKNRSGM2TKNBSGU>. You are receiving this because you authored the thread.Message ID: ***@***.***>

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