📝 Update citation to published Imaging Neuroscience paper

CLAUDE.md

@@ -10,7 +10,7 @@ DIstortion Correction). Phase unwrapping uses a self-contained C++17 port of
 **no Julia runtime is involved**; do not reintroduce one (no `julia.py`, no
 conda recipe, no `FindJulia.cmake`).
 
-Pre-print: <https://www.biorxiv.org/content/10.1101/2023.11.28.568744v1>.
+Paper (Imaging Neuroscience): <https://doi.org/10.1162/IMAG.a.1262>.
 
 ## Layout
 

LICENSE

@@ -1,7 +1,10 @@
 Copyright (c) 2022 Washington University.
 Authored by: Andrew Van							
 
-Please cite https://www.biorxiv.org/content/10.1101/2023.11.28.568744v1	
+Please cite:
+Van AN, Montez DF, Laumann TO, Cho PN, Suljic V, Madison T, et al.
+Frame-wise multi-echo distortion correction for superior functional MRI.
+Imaging Neuroscience 2026; 4 IMAG.a.1262. doi: https://doi.org/10.1162/IMAG.a.1262
 
 warpkit is free for non-commercial use by academic, government,
 and non-profit/not-for-profit institutions. A commercial version of the software is

README.md

@@ -2,10 +2,9 @@
 
 [![Build](https://github.com/vanandrew/warpkit/actions/workflows/build.yml/badge.svg)](https://github.com/vanandrew/warpkit/actions)
 [![PyPI](https://img.shields.io/pypi/v/warpkit)](https://pypi.org/project/warpkit/)
-[![docker](https://ghcr-badge.egpl.dev/vanandrew/warpkit/latest_tag?trim=major&label=ghcr latest)](https://github.com/vanandrew/warpkit/pkgs/container/warpkit)
 [![codecov](https://codecov.io/gh/vanandrew/warpkit/graph/badge.svg?token=S6ZZKOAF8V)](https://codecov.io/gh/vanandrew/warpkit)
 
-A Python library for neuroimaging transforms, focused on the Multi-Echo DIstortion Correction (MEDIC) algorithm. The pre-print is available at <https://www.biorxiv.org/content/10.1101/2023.11.28.568744v1>.
+A Python library for neuroimaging transforms, focused on the Multi-Echo DIstortion Correction (MEDIC) algorithm. The paper is published in *Imaging Neuroscience* at <https://doi.org/10.1162/IMAG.a.1262>.
 
 The phase-unwrapping core is a self-contained C++17 port of [ROMEO](https://github.com/korbinian90/ROMEO) — there is no Julia runtime to install, and binary wheels ship with the ITK pieces statically linked. If you used an older release of warpkit that required `julia` on `PATH`, that step is gone.
 
@@ -194,6 +193,15 @@ wk-convert-fieldmap \
   --output sub-01_run-01_fieldmap.nii
 ```
 
+## Citation
+
+If you use warpkit, please cite:
+
+> Van AN, Montez DF, Laumann TO, Cho PN, Suljic V, Madison T, et al.
+> Frame-wise multi-echo distortion correction for superior functional MRI.
+> *Imaging Neuroscience* 2026; 4 IMAG.a.1262.
+> doi: <https://doi.org/10.1162/IMAG.a.1262>
+
 ## Authors
 
 Vahdeta Suljic &lt;suljic@wustl.edu&gt;, Andrew Van &lt;vanandrew77@gmail.com&gt;

pyproject.toml

@@ -6,7 +6,7 @@ requires-python = ">=3.11"
 authors = [{ name = "Andrew Van", email = "vanandrew77@gmail.com" }]
 keywords = ["neuroimaging"]
 classifiers = ["Programming Language :: Python :: 3"]
-urls = { github = "https://github.com/vanandrew/warpkit" }
+urls = { github = "https://github.com/vanandrew/warpkit", paper = "https://doi.org/10.1162/IMAG.a.1262" }
 # include/romeo/LICENSE is the upstream MIT notice for the ROMEO C++ port; it
 # travels with the headers in source distributions and (via PEP 639
 # license-files) gets bundled into wheels under *.dist-info/licenses/.