A Dash GUI for wrmXpress
Visit the ReadTheDocs website to view comprehensive documentation for the wrmXpress GUI.
wrmXpress is entirely open-source. The code for the back-end is maintained by the Zamanian Lab at the University of Wisconsin-Madison and can be found here. The code for the front-end is maintained by the Wheeler Lab at the University of Wisconsin-Eau Claire and can be found in this repository. To receive support for either the GUI or running wrmXpress remotely, please submit a GitHub Issue at the relevant linked repositories.
When using the wrmXrpress back-end on a remote machine, please cite:
@article{Wheeler2022,
title = {wrmXpress: A modular package for high-throughput image analysis of parasitic and free-living worms},
author = {Wheeler, Nicolas J. AND Gallo, Kendra J. AND Rehborg, Elena J. G. AND Ryan, Kaetlyn T. AND Chan, John D. AND Zamanian, Mostafa},
journal = {PLOS Neglected Tropical Diseases},
volume = {16},
number = {11},
pages = {1-15},
year = {2022},
month = {11},
doi = {10.1371/journal.pntd.0010937},
publisher = {Public Library of Science},
doi = {https://doi.org/10.1371/journal.pntd.0010937},
url = {https://journals.plos.org/plosntds/article?id=10.1371/journal.pntd.0010937},
}
When using the GUI, please site the back-end (above) as well as the following:
@article{Caterer2025,
title = {A graphical user interface for wrmXpress 2.0 streamlines helminth phenotypic screening},
author = {Zachary Caterer and Rachel V. Horejsi and Carly Weber and Blake Mathisen and Chase N. Nelson and Maggie Bagatta and Ireland Coughlin and Megan Wettstein and Ankit Kulshrestha and Hui Siang Benjamin Lee and Leonardo R. Nunn and Mostafa Zamanian and Nicolas J. Wheeler}
journal = {International Journal for Parasitology: Drugs and Drug Resistance},
volume = {27},
pages = {100588},
year = {2025},
issn = {2211-3207},
doi = {https://doi.org/10.1016/j.ijpddr.2025.100588},
url = {https://www.sciencedirect.com/science/article/pii/S2211320725000119},
}