Issues

• Is downsampling recommended or necessary in CUT&Tag analysis?

  yezhengSTAT/CUTTag_tutorial#17 · Filter by author zebr4rzlf opened on Jun 15, 2026
  2

• how to download hg38_gene.tsv?

  yezhengSTAT/CUTTag_tutorial#15 · Filter by author zysmu opened on Feb 19, 2025
  1

• convert bam to bed need sort

  yezhengSTAT/CUTTag_tutorial#14 · Filter by author YFan1997 opened on Dec 17, 2024
  1

• FRiPs calculation without IgG control

  yezhengSTAT/CUTTag_tutorial#11 · Filter by author MatteoFiumara opened on Mar 27, 2024
  2

• Duplication in E.coli genome

  yezhengSTAT/CUTTag_tutorial#10 · Filter by author bio-lilin opened on Jan 2, 2024
  2

• QC: nucleosomal-length fragments

  yezhengSTAT/CUTTag_tutorial#9 · Filter by author Minglu1998 opened on Mar 9, 2023
  1

• Cannot Picard SamSort and/or MarkDuplicate?

  yezhengSTAT/CUTTag_tutorial#8 · Filter by author kiddo18 opened on Dec 7, 2022
  1

• Downstream differential analysis

  yezhengSTAT/CUTTag_tutorial#6 · Filter by author loganminhdang opened on Jun 12, 2022
  3

• Puzzling enrichment peak

  yezhengSTAT/CUTTag_tutorial#5 · Filter by author Siteng999 opened on May 20, 2022
  3

• CUTTAG duplication

  yezhengSTAT/CUTTag_tutorial#4 · Filter by author lengfei5 opened on Jan 20, 2022
  2

• What does "25x25 PE Illumina sequencing" means and how does the reads length influence CUT&Tag?

  yezhengSTAT/CUTTag_tutorial#3 · Filter by author dyinboisry4u opened on May 16, 2021
  5

• A simple question

  yezhengSTAT/CUTTag_tutorial#2 · Filter by author renjincomeon opened on Feb 4, 2021
  6

• Mistake report

  yezhengSTAT/CUTTag_tutorial#1 · Filter by author renjincomeon opened on Feb 1, 2021
  5