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Merged
Peter-Apps merged 2 commits into from
Aug 15, 2026
Merged

Finished updating Notebooks for JupyterLite #55

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670ac6e
Finished updating notebooks to run in JupyterLite.
Peter-Apps Aug 15, 2026
afb5301
Fixed Typo in CC1_CMS_activity
Peter-Apps Aug 15, 2026
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35 changes: 25 additions & 10 deletions content/CC1_CMS_activity.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -34,15 +34,23 @@
"outputs": [],
"source": [
"# Installing some extra programs to help us (this may take a minute the first time this is run)\n",
"!pip -q install gdown==4.6.0\n",
"import gdown\n",
"\n",
"import pandas as pd\n",
"import numpy as np\n",
"import matplotlib as mpl\n",
"import matplotlib.pyplot as plt\n",
"import pyodide_http\n",
"pyodide_http.patch_all()\n"
"\n",
"\n",
"# run these fixes only if we're running on a JupyerLite / JupyterEverywhere platform\n",
"import sys\n",
"if (sys.platform == 'emscripten'):\n",
" import pyodide_http\n",
" from pyodide.http import pyfetch\n",
" import io\n",
" pyodide_http.patch_all()\n",
"\n",
"else:\n",
" !pip -q install gdown==4.6.0\n",
" import gdown"
]
},
{
Expand All @@ -54,11 +62,18 @@
},
"outputs": [],
"source": [
"# Load in the dimuon data set from Google Drive\n",
"muon_csv_id = '1UIgcmWP6Jzk2CX2aZqG9cSzR5vGBbQjk'\n",
"file_name = \"Muons.csv\"\n",
"gdown.download(id=muon_csv_id, output=file_name)\n",
"muons = pd.read_csv(file_name)\n"
"# Load in the dimuon data set from Google Drive (or GitHub if we're using JupyterLite)\n",
"# JupyterLite won't load the full 2015 dataset without crashing due to memory, so we're using the 2011 dataset instead\n",
"if (sys.platform == 'emscripten'):\n",
" # Load the 2011 dataset (500k rows)\n",
" url = \"https://raw.githubusercontent.com/QuarkNet-HEP/coding-camp/refs/heads/main/content/data/Double_Muon_Run2011A.csv\"\n",
" muons = pd.read_csv(url)\n",
"else:\n",
" # Load the full 2015 dataset (1M+ rows)\n",
" muon_csv_id = '1UIgcmWP6Jzk2CX2aZqG9cSzR5vGBbQjk'\n",
" file_name = \"Muons.csv\"\n",
" gdown.download(id=muon_csv_id, output=file_name)\n",
" muons = pd.read_csv(file_name)"
]
},
{
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8 changes: 6 additions & 2 deletions content/Elements.ipynb
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Expand Up @@ -41,8 +41,12 @@
"%matplotlib inline\n",
"import matplotlib.pyplot as plt\n",
"pd.options.display.max_rows = 120\n",
"import pyodide_http\n",
"pyodide_http.patch_all()\n"
"\n",
"# run these fixes only if we're running on a JupyerLite / JupyterEverywhere platform\n",
"import sys\n",
"if (sys.platform == 'emscripten'):\n",
" import pyodide_http\n",
" pyodide_http.patch_all()\n"
]
},
{
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9 changes: 6 additions & 3 deletions content/Falcon_9_Rocket_Data.ipynb
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Expand Up @@ -27,16 +27,19 @@
"mpl.rcParams.update(mpl.rcParamsDefault)\n",
"%matplotlib inline\n",
"\n",
"import pyodide_http\n",
"pyodide_http.patch_all()\n",
"# run these fixes only if we're running on a JupyerLite / JupyterEverywhere platform\n",
"import sys\n",
"if (sys.platform == 'emscripten'):\n",
" import pyodide_http\n",
" pyodide_http.patch_all()\n",
"\n",
"\n",
"# Set the graph size to be large\n",
"#plt.rcParams['figure.figsize'] = (10,6)\n",
"#plt.rcParams['figure.dpi'] = 600\n",
"\n",
"#Importing the data set\n",
"data_url = \"https://raw.githubusercontent.com/Peter-Apps/Coding-in-MS-HS/master/Falcon%209%20Rocket%20Data.csv\"\n",
"data_url = \"https://raw.githubusercontent.com/QuarkNet-HEP/coding-camp/refs/heads/main/content/data/Falcon%209%20Rocket%20Data.csv\"\n",
"data = pd.read_csv(data_url,on_bad_lines='skip')"
]
},
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29 changes: 26 additions & 3 deletions content/basic_stats.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -24,8 +24,12 @@
"import numpy as np\n",
"import matplotlib as mpl\n",
"import matplotlib.pyplot as plt\n",
"import pyodide_http\n",
"pyodide_http.patch_all()\n"
"\n",
"# run these fixes only if we're running on a JupyerLite / JupyterEverywhere platform\n",
"import sys\n",
"if (sys.platform == 'emscripten'):\n",
" import pyodide_http\n",
" pyodide_http.patch_all()\n"
]
},
{
Expand All @@ -36,7 +40,7 @@
"outputs": [],
"source": [
"# read in a data file.\n",
"data = pd.read_csv('https://github.com/QuarkNet-HEP/coding-camp/raw/main/data/Double_Muon_Run2011A.csv')\n",
"data = pd.read_csv('https://raw.githubusercontent.com/QuarkNet-HEP/coding-camp/refs/heads/main/content/data/Double_Muon_Run2011A.csv')\n",
"data.head()"
]
},
Expand Down Expand Up @@ -168,6 +172,25 @@
"## Credits\n",
"This notebook was designed by [Quarknet](https://quarknet.org/) Teaching and Learning Fellow [Adam LaMee](https://adamlamee.github.io/). The handy csv files were created from the CMS Run2011A primary datasets and converted from ROOT format by the masterful [Tom McCauley](https://github.com/tpmccauley). More can be found on the [CERN OpenData](http://opendata.cern.ch/?ln=en) site, like [here](http://opendata.cern.ch/record/545). The 3D vector image can be found on [WikiMedia Commons](https://commons.wikimedia.org/wiki/File:Coord_XYZ.svg). Finally, thanks to the great folks at [Binder](https://mybinder.org/) and [Google Colaboratory](https://colab.research.google.com/notebooks/intro.ipynb) for making this notebook interactive without you needing to download it or install [Jupyter](https://jupyter.org/) on your own device. Find more activities and license info at [CODINGinK12.org](http://www.codingink12.org)."
]
},
{
"cell_type": "markdown",
"id": "f40c8fac",
"metadata": {},
"source": [
"# Acknowledgements & Licenses\n",
"\n",
"The development and implementation of these materials and workshop were additionally funded by generous support from IRIS-HEP, the [Institute for Research and Innovation in Software for High Energy Physics](https://iris-hep.org/).\n",
"\n",
"This work is licensed under a\n",
"[Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License][cc-by-nc-sa].\n",
"\n",
"[![CC BY-NC-SA 4.0][cc-by-nc-sa-image]][cc-by-nc-sa]\n",
"\n",
"[cc-by-nc-sa]: http://creativecommons.org/licenses/by-nc-sa/4.0/\n",
"[cc-by-nc-sa-image]: https://licensebuttons.net/l/by-nc-sa/4.0/88x31.png\n",
"[cc-by-nc-sa-shield]: https://img.shields.io/badge/License-CC%20BY--NC--SA%204.0-lightgrey.svg"
]
}
],
"metadata": {
Expand Down
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