Read-Lab-UCI
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Rare-Event-Sampling-Gene-Networks
Rare-Event-Sampling-Gene-Networks PublicPublic repo for code relevant to "Rare-event sampling of epigenetic landscapes and phenotype transitions"
MATLAB 1
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DNA-methylation-maintenance-kinetics
DNA-methylation-maintenance-kinetics PublicThis is a code repository for Busto-Moner, et al., BioRxiv 2019, which studies the DNA methylation maintenance by statistical analysis and stochastic modeling
MATLAB
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Stochastic_Coexpression_Landscape_Analysis
Stochastic_Coexpression_Landscape_Analysis PublicPublic repo for code relevant to "Analysis of Single-Cell Gene Pair Coexpression Landscapes by Stochastic Kinetic Modeling Reveals Gene-Pair Interactions in Development"
Python
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Repositories
- Computational-Methods-for-Stochastic-DNA-Methylation-Dynamics Public Forked from max-lemus/Computational-Methods-for-Stochastic-DNA-Methylation-Dynamics
Read-Lab-UCI/Computational-Methods-for-Stochastic-DNA-Methylation-Dynamics’s past year of commit activity - TelegraphLikelihoodInfer Public Forked from junhag2/TelegraphLikelihoodInfer
maximum likelihood inferenence of kinetic parameters of telegraph model by computing profile likelihood
Read-Lab-UCI/TelegraphLikelihoodInfer’s past year of commit activity - Methylation-exact Public
exact model of methylation of DNA with collaborative force from other CpG sites
Read-Lab-UCI/Methylation-exact’s past year of commit activity - Epigenetics Public
Read-Lab-UCI/Epigenetics’s past year of commit activity - DNA-methylation-maintenance-kinetics Public
This is a code repository for Busto-Moner, et al., BioRxiv 2019, which studies the DNA methylation maintenance by statistical analysis and stochastic modeling
Read-Lab-UCI/DNA-methylation-maintenance-kinetics’s past year of commit activity - Stochastic_Coexpression_Landscape_Analysis Public
Public repo for code relevant to "Analysis of Single-Cell Gene Pair Coexpression Landscapes by Stochastic Kinetic Modeling Reveals Gene-Pair Interactions in Development"
Read-Lab-UCI/Stochastic_Coexpression_Landscape_Analysis’s past year of commit activity - Rare-Event-Sampling-Gene-Networks Public
Public repo for code relevant to "Rare-event sampling of epigenetic landscapes and phenotype transitions"
Read-Lab-UCI/Rare-Event-Sampling-Gene-Networks’s past year of commit activity
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