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Update uv.lock and title in README. Run nox #108: Commit 3d64559 pushed by terrycojones
9m 14s master
master
9m 14s
Bump idna from 3.11 to 3.15 Run nox #107: Pull request #861 opened by dependabot Bot
9m 19s dependabot/uv/idna-3.15
dependabot/uv/idna-3.15
9m 19s
Made the extract_sam use a temporary file to store SAM into. Run nox #106: Commit 13dc37f pushed by terrycojones
9m 20s master
master
9m 20s
Updated uv.lock following dependabot pull request. Run nox #105: Commit 796d684 pushed by terrycojones
9m 42s master
master
9m 42s
Merge pull request #860 from acorg/dependabot/uv/urllib3-2.7.0 Run nox #104: Commit 145a480 pushed by terrycojones
9m 16s master
master
9m 16s
Bump urllib3 from 2.6.3 to 2.7.0 Run nox #103: Pull request #860 opened by dependabot Bot
9m 31s dependabot/uv/urllib3-2.7.0
dependabot/uv/urllib3-2.7.0
9m 31s
Fix legend region start offset in plot-coverage-depth.py to be 1-based. Run nox #102: Commit 59b40df pushed by terrycojones
8m 52s master
master
8m 52s
Fix (properly this time) legend region start offset in plot-coverage-… Run nox #101: Commit b63f789 pushed by terrycojones
9m 34s master
master
9m 34s
Fix legend region start offset in plot-coverage-depth.py to be 1-based. Run nox #100: Commit 6eb4a5f pushed by terrycojones
8m 54s master
master
8m 54s
Merge pull request #859 from terrycojones/ambiguous-N Run nox #99: Commit 3bfa82c pushed by terrycojones
9m 19s master
master
9m 19s
Added information about N bases coming back from compareDNAReads Run nox #98: Pull request #859 opened by terrycojones
9m 6s terrycojones:ambiguous-N
terrycojones:ambiguous-N
9m 6s
Merge pull request #858 from terrycojones/set-site Run nox #97: Commit 61f83cc pushed by terrycojones
9m 24s master
master
9m 24s
Added --setSite to filter-fasta.py to allow setting of the base (and quality) at sites. Run nox #96: Pull request #858 opened by terrycojones
9m 8s terrycojones:set-site
terrycojones:set-site
9m 8s
Added uv.lock Run nox #95: Commit 265a629 pushed by terrycojones
9m 21s master
master
9m 21s
Merge pull request #857 from terrycojones/uv-lock Run nox #94: Commit e98e85b pushed by terrycojones
9m 24s master
master
9m 24s
Added uv sync to git pre-commit hook script. Run nox #93: Pull request #857 synchronize by terrycojones
9m 11s terrycojones:uv-lock
terrycojones:uv-lock
9m 11s
Merge pull request #856 from terrycojones/trivial-clean-ups Run nox #92: Commit b8ab4c9 pushed by terrycojones
9m 31s master
master
9m 31s
Trivial clean ups Run nox #91: Pull request #856 synchronize by terrycojones
9m 15s terrycojones:trivial-clean-ups
terrycojones:trivial-clean-ups
9m 15s
Merge pull request #855 from terrycojones/fix-fasta-identity-table Run nox #90: Commit cbf8b92 pushed by terrycojones
9m 10s master
master
9m 10s
Fix two bugs in bin/fasta-identity-table.py Run nox #89: Pull request #855 synchronize by terrycojones
9m 47s terrycojones:fix-fasta-identity-table
terrycojones:fix-fasta-identity-table
9m 47s
Added uv sync to git pre-commit hook script. Run nox #88: Pull request #857 opened by terrycojones
1m 13s terrycojones:uv-lock
terrycojones:uv-lock
1m 13s
Fix two bugs in bin/fasta-identity-table.py Run nox #87: Pull request #855 synchronize by terrycojones
9m 23s terrycojones:fix-fasta-identity-table
terrycojones:fix-fasta-identity-table
9m 23s
Fix two bugs in bin/fasta-identity-table.py Run nox #86: Pull request #855 synchronize by terrycojones
9m 41s terrycojones:fix-fasta-identity-table
terrycojones:fix-fasta-identity-table
9m 41s
Merge pull request #854 from terrycojones/entropy Run nox #85: Commit baf2a7b pushed by terrycojones
9m 27s master
master
9m 27s
Copied undocumented and now-deprecated sklearn.metrics.cluster entropy function so we can continue to use it. Run nox #84: Pull request #854 synchronize by terrycojones
9m 12s terrycojones:entropy
terrycojones:entropy
9m 12s