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Update uv.lock and title in README. Format and/or lint #108: Commit 3d64559 pushed by terrycojones
17s master
master
17s
Bump idna from 3.11 to 3.15 Format and/or lint #107: Pull request #861 opened by dependabot Bot
16s dependabot/uv/idna-3.15
dependabot/uv/idna-3.15
16s
Made the extract_sam use a temporary file to store SAM into. Format and/or lint #106: Commit 13dc37f pushed by terrycojones
18s master
master
18s
Updated uv.lock following dependabot pull request. Format and/or lint #105: Commit 796d684 pushed by terrycojones
14s master
master
14s
Merge pull request #860 from acorg/dependabot/uv/urllib3-2.7.0 Format and/or lint #104: Commit 145a480 pushed by terrycojones
23s master
master
23s
Bump urllib3 from 2.6.3 to 2.7.0 Format and/or lint #103: Pull request #860 opened by dependabot Bot
21s dependabot/uv/urllib3-2.7.0
dependabot/uv/urllib3-2.7.0
21s
Fix legend region start offset in plot-coverage-depth.py to be 1-based. Format and/or lint #102: Commit 59b40df pushed by terrycojones
20s master
master
20s
Fix (properly this time) legend region start offset in plot-coverage-… Format and/or lint #101: Commit b63f789 pushed by terrycojones
26s master
master
26s
Fix legend region start offset in plot-coverage-depth.py to be 1-based. Format and/or lint #100: Commit 6eb4a5f pushed by terrycojones
25s master
master
25s
Merge pull request #859 from terrycojones/ambiguous-N Format and/or lint #99: Commit 3bfa82c pushed by terrycojones
15s master
master
15s
Added information about N bases coming back from compareDNAReads Format and/or lint #98: Pull request #859 opened by terrycojones
11s terrycojones:ambiguous-N
terrycojones:ambiguous-N
11s
Merge pull request #858 from terrycojones/set-site Format and/or lint #97: Commit 61f83cc pushed by terrycojones
18s master
master
18s
Added --setSite to filter-fasta.py to allow setting of the base (and quality) at sites. Format and/or lint #96: Pull request #858 opened by terrycojones
14s terrycojones:set-site
terrycojones:set-site
14s
Added uv.lock Format and/or lint #95: Commit 265a629 pushed by terrycojones
17s master
master
17s
Merge pull request #857 from terrycojones/uv-lock Format and/or lint #94: Commit e98e85b pushed by terrycojones
23s master
master
23s
Added uv sync to git pre-commit hook script. Format and/or lint #93: Pull request #857 synchronize by terrycojones
13s terrycojones:uv-lock
terrycojones:uv-lock
13s
Merge pull request #856 from terrycojones/trivial-clean-ups Format and/or lint #92: Commit b8ab4c9 pushed by terrycojones
16s master
master
16s
Trivial clean ups Format and/or lint #91: Pull request #856 synchronize by terrycojones
12s terrycojones:trivial-clean-ups
terrycojones:trivial-clean-ups
12s
Merge pull request #855 from terrycojones/fix-fasta-identity-table Format and/or lint #90: Commit cbf8b92 pushed by terrycojones
14s master
master
14s
Fix two bugs in bin/fasta-identity-table.py Format and/or lint #89: Pull request #855 synchronize by terrycojones
16s terrycojones:fix-fasta-identity-table
terrycojones:fix-fasta-identity-table
16s
Added uv sync to git pre-commit hook script. Format and/or lint #88: Pull request #857 opened by terrycojones
13s terrycojones:uv-lock
terrycojones:uv-lock
13s
Fix two bugs in bin/fasta-identity-table.py Format and/or lint #87: Pull request #855 synchronize by terrycojones
19s terrycojones:fix-fasta-identity-table
terrycojones:fix-fasta-identity-table
19s
Fix two bugs in bin/fasta-identity-table.py Format and/or lint #86: Pull request #855 synchronize by terrycojones
16s terrycojones:fix-fasta-identity-table
terrycojones:fix-fasta-identity-table
16s
Merge pull request #854 from terrycojones/entropy Format and/or lint #85: Commit baf2a7b pushed by terrycojones
16s master
master
16s
Copied undocumented and now-deprecated sklearn.metrics.cluster entropy function so we can continue to use it. Format and/or lint #84: Pull request #854 synchronize by terrycojones
14s terrycojones:entropy
terrycojones:entropy
14s