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Genex-Eirene coupling - #4

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jRoeltgen wants to merge 48 commits into
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genex_development
Open

Genex-Eirene coupling#4
jRoeltgen wants to merge 48 commits into
mainfrom
genex_development

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@jRoeltgen

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Add GENE-X as an optional gyrokinetic code to couple to Eirene. Standardize the reorganization started with Gkeyll release. Testing includes unit tests for common files and gene-x/eirene specific coupling as well as a full integrated test that uses an analytic source in replacement to Eirene.

jRoeltgen and others added 30 commits March 26, 2026 12:58
… initial genex data. Optimize read with dask.
…, next_eirene_index and several untested logic branches.
jRoeltgen added 10 commits June 26, 2026 15:04
Unit tests pass and fake_eirene_run with static GENE-X data passes.
This logic branch allows splitting the sources by temperatures
of different species (i.e. atoms, molecules, etc.). Default
maps are only valid for a single species per species group.
The integrated tests have a dedicated README in ./tests/genex/integration
detailing usage
@jRoeltgen
jRoeltgen requested a review from akashukla July 8, 2026 05:44
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