MONSDA CI

Workflow runs for MONSDA CI

• update to perl container

  completed successfully:
  MONSDA CI#71:Commit6d6f392pushedbyjfallmann
  main

  Oct 27, 20263m 17s
  More actions for workflow run 71

• cleanup, test updates

  completed successfully:
  MONSDA CI#70:Commit10478bfpushedbyjfallmann
  main

  Oct 27, 20262m 57s
  More actions for workflow run 70

• Dev bowtie2

  completed successfully:
  MONSDA CI#69:Pull request#73synchronizebyjfallmann
  dev_bowtie2

  Oct 27, 20263m 11s
  More actions for workflow run 69

• add extra option to build_all_local to enable single container builds

  completed successfully:
  MONSDA CI#68:Commit1880143pushedbyjfallmann
  main

  Oct 22, 20262m 50s
  More actions for workflow run 68

• Dev hotfix

  completed successfully:
  MONSDA CI#67:Pull request#72openedbyjfallmann
  dev_hotfix

  Oct 22, 20262m 55s
  More actions for workflow run 67

• fix in postde path resolution

  completed successfully:
  MONSDA CI#66:Commit60862c0pushedbyjfallmann
  main

  Oct 21, 20262m 57s
  More actions for workflow run 66

• spike-in fix for missing genes

  completed successfully:
  MONSDA CI#65:Commit051f496pushedbyjfallmann
  main

  Oct 21, 20262m 23s
  More actions for workflow run 65

• unified sample heatmaps across DE/DEU/DAS

  failed:
  MONSDA CI#64:Commitd9ddbf7pushedbyjfallmann
  v1.5.0

  Oct 20, 202625s
  More actions for workflow run 64

• unified sample heatmaps across DE/DEU/DAS

  completed successfully:
  MONSDA CI#63:Commitd9ddbf7pushedbyjfallmann
  main

  Oct 20, 20262m 43s
  More actions for workflow run 63

• make decompression an extra step instead of a repeated process

  failed:
  MONSDA CI#62:Commitabc4233pushedbyjfallmann
  v1.5.0

  Oct 20, 202628s
  More actions for workflow run 62

• make decompression an extra step instead of a repeated process

  completed successfully:
  MONSDA CI#61:Commitabc4233pushedbyjfallmann
  main

  Oct 20, 20262m 37s
  More actions for workflow run 61

• Dev hotfix

  completed successfully:
  MONSDA CI#60:Pull request#71openedbyjfallmann
  dev_hotfix

  Oct 20, 20262m 43s
  More actions for workflow run 60

• hardening gtf read in DE tool calls to fix rare race condition

  completed successfully:
  MONSDA CI#59:Commit43a5ec3pushedbyjfallmann
  main

  Oct 19, 20262m 41s
  More actions for workflow run 59

• fix in github action container push

  failed:
  MONSDA CI#58:Commit731a27dpushedbyjfallmann
  v1.5.0

  Oct 19, 20262m 19s
  More actions for workflow run 58

• fix in github action container push

  failed:
  MONSDA CI#57:Commit731a27dpushedbyjfallmann
  main

  Oct 19, 20262m 11s
  More actions for workflow run 57

• strandedness config for configurator fix

  failed:
  MONSDA CI#56:Commit4ef99aapushedbyjfallmann
  v1.5.0

  Oct 19, 20262m 16s
  More actions for workflow run 56

• strandedness config for configurator fix

  failed:
  MONSDA CI#55:Commit4ef99aapushedbyjfallmann
  main

  Oct 19, 20262m 16s
  More actions for workflow run 55

• skip monsda container CI/CD until new release was picked up by bioconda

  failed:
  MONSDA CI#54:Commit58f74ebpushedbyjfallmann
  main

  Oct 19, 20261m 39s
  More actions for workflow run 54

• push single-layer SIF artifacts instead of multi-layer docker images

  completed successfully:
  MONSDA CI#53:Commit6c6af21pushedbyjfallmann
  main

  Oct 18, 20262m 18s
  More actions for workflow run 53

• added clearer error message on conda/apptainer usage with uncombinabl…

  completed successfully:
  MONSDA CI#52:Commit349a39fpushedbyjfallmann
  main

  Oct 18, 20262m 47s
  More actions for workflow run 52

• updated action refs to newest versions

  completed successfully:
  MONSDA CI#51:Commitcf18189pushedbyjfallmann
  main

  Oct 15, 20262m 40s
  More actions for workflow run 51

• fixed missing dependencies after cleanup for TRACKS

  failed:
  MONSDA CI#50:Commitc87291bpushedbyjfallmann
  v1.5.0

  Oct 15, 20262m 51s
  More actions for workflow run 50

• fixed missing dependencies after cleanup for TRACKS

  completed successfully:
  MONSDA CI#49:Commitc87291bpushedbyjfallmann
  main

  Oct 15, 20262m 44s
  More actions for workflow run 49

• MONSDA CI

  failed:
  MONSDA CI#48:Manually runbyjfallmann
  dev_1.5.0

  Oct 15, 20263m 36s
  More actions for workflow run 48

• Dev 1.5.0

  completed successfully:
  MONSDA CI#47:Pull request#70synchronizebyjfallmann
  dev_1.5.0

  Oct 13, 20262m 40s
  More actions for workflow run 47