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Edited WBS #4

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14 changes: 7 additions & 7 deletions design_documents/WBS_document.md
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Original file line number Diff line number Diff line change
@@ -1,8 +1,9 @@
TCGA matchmaker

- Activity 1: Set up GitHub repository
- [X] Task 1.1: Set up GitHub repository
- [X] Task 1.2: Create high-level description document
- [X] Task 1.3: Create code structure
- [x] Task 1.1: Set up GitHub repository
- [x] Task 1.2: Create high-level description document
- [x] Task 1.3: Create code structure
- Activity 2: Build prototype I
- Activity 2.1 : Refine design to describe tasks
- [ ] Task 2.1.1: Break project into activities
Expand All @@ -13,9 +14,8 @@ TCGA matchmaker
- [ ] Task 2.2.3: Define save output function
- Activity 2.3: Implement read data and save output and one feature in the analsyis
- [ ] Task 2.3.1: Implement read/create data function
- [ ] Task 2.3.2: Implement one analysis function: compute profile score for 1 TCGA sample
- [ ] The first implementation of this function will be with a mockup input (like two numbers) and a simple output - the difference
- [ ] The next step is to have a proper input in the correct format - just that it will be a scaled up input - just a small matrix 4x2 for instance and for that I compute a simple match score again: the sum of the differences between my sample and my reference profile
- [ ] Task 2.3.2: Implement one analysis function: compute profile score for 1 TCGA sample - [ ] The first implementation of this function will be with a mockup input (like two numbers) and a simple output - the difference - [ ] The next step is to have a proper input in the correct format - just that it will be a scaled up input - just a small matrix 4x2 for instance and for that I compute a simple match score again: the sum of the differences between my sample and my reference profile
- [ ] Task 2.3.3: Implement save output function
- Activity 2.4: Test prototype
- Activity 2.4: Test prototype
- Activity 3: Build prototype II
- Activity 4: Build prototype III