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@OBAMANEXT OBAMA-NEXT Project

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    14 repositories

    • cyz2json

      Public
      Convert CytoBuoy CYZ format flow cytometry data to a JSON representation.
      C#
      •
      Other
      •5•8•8•0•Updated Apr 15, 2026Apr 15, 2026

    • IP-35-Joint-Species-Distribution-Modeling-HMSC

      Public
      R
      •0•0•0•0•Updated Feb 13, 2026Feb 13, 2026

    • Idealized-model-for-phytoplankton-competition

      Public
      An idealized model for phytoplankton competition based on the chemostat framework developed by HCMR, Greece. The model is evaluated against pico-phytoplankton d…
      MATLAB
      •0•0•0•0•Updated Feb 4, 2026Feb 4, 2026

    • IP24-eDNA-based-fish-abundance-estimates-for-fish-stock-assessment

      Public
      Having precise estimates of fish abundance and biomass is key for ensuring a sustainable exploitation of marine resources. This IP aims to integrate eDNA-based …
      0•0•0•0•Updated Jan 28, 2026Jan 28, 2026

    • IP23-Fish-eDNA-to-assess-estuarine-ecological-status

      Public
      Use of eDNA metabarcoding to monitor estuarine fish and assess estuarine ecological status, in compliance with the Water Framework Directive (WFD), for the eval…
      0•0•0•0•Updated Jan 28, 2026Jan 28, 2026

    • IP33-data-conversion-for-viewer

      Public
      IP33 Copepod Mean Size and Total Abundance ecological indicator
      R
      •0•0•0•0•Updated Jan 27, 2026Jan 27, 2026

    • obamanext.github.io

      Public
      Web site
      R
      •0•2•0•0•Updated Jan 12, 2026Jan 12, 2026

    • IP26-Mapping-of-biomass-and-carbon-content-of-coastal-vegetation-using-green-LiDAR-on-drones

      Public
      Using LiDAR technology to precisely estimate the volume and biomass of submerged vegetation (seagrass, macroalgae, etc.) in the coastal zone
      0•0•0•0•Updated Jan 12, 2026Jan 12, 2026

    • IP9-Population-estimates-of-seabirds-based-on-drone-images-and-object-recognition-AI-ML

      Public
      Population estimates of seabird colonies, including information on species, age, sex, nesting status, and feeding activity. To replace ineffective methods using…
      0•0•0•0•Updated Jan 12, 2026Jan 12, 2026

    • IP2-Coastal-vegetation-mapping-upscaled-from-drones-to-satellites

      Public
      Fusion of high-resolution, small scale drone data and lower-resolution, large scale satellite images for upscaling of coastal vegetation maps (macroalgae, seagr…
      0•0•0•0•Updated Jan 12, 2026Jan 12, 2026

    • IP1-Seagrass-mapping-distributions-and-ecological-status

      Public
      Drone-based seagrass mapping, including in situ ground truthing, model training (ML), testing and validation. The code repository is hosted at the SeaBee github…
      0•0•0•0•Updated Jan 12, 2026Jan 12, 2026

    • SDM_porpoise_IP18

      Public
      SDM analyses of harbour porpoises in the Inner Danish Waters.
      R
      •
      MIT License
      •0•0•0•0•Updated Dec 19, 2025Dec 19, 2025

    • expertISDM

      Public
      Source code for fitting the Integrated Species Distribution Model for pikeperch (Sander lucioperca) larvae in Porvoo-Sipoo archipelago as described in 10.1002/e…
      R
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Dec 17, 2025Dec 17, 2025

    • .github

      Public
      The OBAMA-NEXT toolbox will form the basis of evidence-based decision making, delivering information products for marine biodiversity
      0•1•0•0•Updated Nov 3, 2023Nov 3, 2023
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