bd init: wire sc-compose to dedicated sc-compose beads DB (server mode)

.beads/.gitignore

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+# Dolt database (managed by Dolt, not git)
+dolt/
+embeddeddolt/
+proxieddb/
+
+# Runtime files
+bd.sock
+bd.sock.startlock
+sync-state.json
+last-touched
+.exclusive-lock
+
+# Daemon runtime (lock, log, pid)
+daemon.*
+
+# Push state (runtime, per-machine)
+push-state.json
+
+# Lock files (various runtime locks)
+*.lock
+
+# Credential key (encryption key for federation peer auth — never commit)
+.beads-credential-key
+
+# Local version tracking (prevents upgrade notification spam after git ops)
+.local_version
+
+proxied_server_client_info.json
+
+# Worktree redirect file (contains relative path to main repo's .beads/)
+# Must not be committed as paths would be wrong in other clones
+redirect
+
+# Sync state (local-only, per-machine)
+# These files are machine-specific and should not be shared across clones
+.sync.lock
+
+# Workspace operation gate (internal/workspacegate): physical-root gate
+# files live beside the guarded root inside .beads (e.g. dolt.gate.lock)
+*.gate.lock*
+export-state/
+export-state.json
+last_pull
+
+# Ephemeral store (SQLite - wisps/molecules, intentionally not versioned)
+ephemeral.sqlite3
+ephemeral.sqlite3-journal
+ephemeral.sqlite3-wal
+ephemeral.sqlite3-shm
+
+# Dolt server management (auto-started by bd)
+dolt-server.pid
+dolt-server.log
+dolt-server.lock
+dolt-server.port
+dolt-server.activity
+
+# Debug-mode pprof artifacts (written when dolt.debug: true in config.yaml)
+dolt-pprof/
+
+# Corrupt backup directories (created by bd doctor --fix recovery)
+*.corrupt.backup/
+
+# Backup data (auto-exported JSONL, local-only)
+backup/
+
+# Per-project environment file (Dolt connection config, GH#2520)
+.env
+
+# Legacy files (from pre-Dolt versions)
+*.db
+*.db?*
+*.db-journal
+*.db-wal
+*.db-shm
+db.sqlite
+bd.db
+# NOTE: Do NOT add negation patterns here.
+# They would override fork protection in .git/info/exclude.
+# Config files (metadata.json, config.yaml) are tracked by git by default
+# since no pattern above ignores them.

.beads/README.md

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+# Beads - AI-Native Issue Tracking
+
+Welcome to Beads! This repository uses **Beads** for issue tracking - a modern, AI-native tool designed to live directly in your codebase alongside your code.
+
+## What is Beads?
+
+Beads is issue tracking that lives in your repo, making it perfect for AI coding agents and developers who want their issues close to their code. No web UI required - everything works through the CLI and integrates seamlessly with git.
+
+**Learn more:** [github.com/steveyegge/beads](https://github.com/steveyegge/beads)
+
+## Quick Start
+
+### Essential Commands
+
+```bash
+# Create new issues
+bd create "Add user authentication"
+
+# View all issues
+bd list
+
+# View issue details
+bd show <issue-id>
+
+# Update issue status
+bd update <issue-id> --claim
+bd update <issue-id> --status done
+
+# Sync with Dolt remote
+bd dolt push
+```
+
+### Working with Issues
+
+Issues in Beads are:
+- **Git-native**: Stored in Dolt database with version control and branching
+- **AI-friendly**: CLI-first design works perfectly with AI coding agents
+- **Branch-aware**: Issues can follow your branch workflow
+- **Sync-ready**: Uses Dolt remotes for backup and team sharing
+
+## Why Beads?
+
+✨ **AI-Native Design**
+- Built specifically for AI-assisted development workflows
+- CLI-first interface works seamlessly with AI coding agents
+- No context switching to web UIs
+
+🚀 **Developer Focused**
+- Issues live in your repo, right next to your code
+- Works offline, syncs when you push
+- Fast, lightweight, and stays out of your way
+
+🔧 **Git Integration**
+- Dolt-native sync via bd dolt push / bd dolt pull
+- Branch-aware issue tracking
+- Dolt-native three-way merge resolution
+
+## Get Started with Beads
+
+Try Beads in your own projects:
+
+```bash
+# Install Beads
+curl -sSL https://raw.githubusercontent.com/steveyegge/beads/main/scripts/install.sh | bash
+
+# Initialize in your repo
+bd init
+
+# Create your first issue
+bd create "Try out Beads"
+```
+
+## Learn More
+
+- **Documentation**: [github.com/steveyegge/beads/docs](https://github.com/steveyegge/beads/tree/main/docs)
+- **Quick Start Guide**: Run `bd quickstart`
+- **Examples**: [github.com/steveyegge/beads/examples](https://github.com/steveyegge/beads/tree/main/examples)
+
+---
+
+*Beads: Issue tracking that moves at the speed of thought* ⚡

.beads/config.yaml

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+# Beads Configuration File
+# This file configures default behavior for all bd commands in this repository
+# All settings can also be set via environment variables (BD_* prefix)
+# or overridden with command-line flags
+
+# Issue prefix for this repository (used by bd init)
+# If not set, bd init will auto-detect from directory name
+# Example: issue-prefix: "myproject" creates issues like "myproject-1", "myproject-2", etc.
+# issue-prefix: ""
+
+# Use no-db mode: JSONL-only, no Dolt database
+# When true, .beads/issues.jsonl is the only local store
+# no-db: false
+
+# Enable JSON output by default
+# json: false
+
+# Feedback title formatting for mutating commands (create/update/close/dep/edit)
+# 0 = hide titles, N > 0 = truncate to N characters
+# output:
+#   title-length: 255
+
+# Default actor for audit trails (overridden by BEADS_ACTOR or --actor)
+# actor: ""
+
+# Optional JSONL sidecar for explicit agent/tool interaction audit records.
+# Issue history is always recorded in the database and is visible with
+# bd history <id> --events; this only controls .beads/interactions.jsonl.
+# audit:
+#   enabled: false
+
+# Export events (audit trail) to .beads/events.jsonl on each flush/sync
+# When enabled, new events are appended incrementally using a high-water mark.
+# Use 'bd export --events' to trigger manually regardless of this setting.
+# events-export: false
+
+# Multi-repo configuration (experimental - bd-307)
+# Allows hydrating from multiple repositories and routing writes to the correct database
+# repos:
+#   primary: "."  # Primary repo (where this database lives)
+#   additional:   # Additional repos to hydrate from (read-only)
+#     - ~/beads-planning  # Personal planning repo
+#     - ~/work-planning   # Work planning repo
+
+# Dolt-native backup (periodic backup for off-machine recovery)
+# This is full database backup only. Cross-machine sync uses Dolt remotes.
+# backup:
+#   enabled: false     # Disable auto-backup entirely
+#   interval: 15m      # Minimum time between auto-backups
+#   git-push: false    # Disable git push (backup locally only)
+#   git-repo: ""       # Separate git repo for backups (default: project repo)
+
+# Optional JSONL auto-export for viewers, interchange, and issue-level migration.
+# Disabled by default; enable only when an integration needs fresh .beads/issues.jsonl.
+# Use relative paths under .beads/ for JSONL import/export filenames.
+# export:
+#   auto: false
+#   path: issues.jsonl
+#   interval: 60s
+#   git-add: false
+# import:
+#   path: issues.jsonl
+
+# Integration settings (access with 'bd config get/set')
+# Non-secret keys (stored in the database):
+# - jira.url, jira.project
+# - linear.team_id
+# - github.org, github.repo
+#
+# Secret keys (stored in this file but prefer env vars to avoid git exposure):
+# - linear.api_key  → use LINEAR_API_KEY env var instead
+# - github.token    → use GITHUB_TOKEN env var instead
+
+dolt.shared-server: true

.beads/hooks/post-checkout

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+#!/usr/bin/env sh
+# --- BEGIN BEADS INTEGRATION v1.3.0 ---
+# This section is managed by beads. Do not remove these markers.
+if command -v bd >/dev/null 2>&1; then
+  export BD_GIT_HOOK=1
+  _bd_timeout=${BEADS_HOOK_TIMEOUT:-300}
+  case "$_bd_timeout" in
+    *[!0-9]*|'') _bd_timeout_invalid=1 ;;
+    *[1-9]*) _bd_timeout_invalid=0 ;;
+    *) _bd_timeout_invalid=1 ;;
+  esac
+  if [ "$_bd_timeout_invalid" -eq 1 ]; then
+    echo >&2 "beads: invalid BEADS_HOOK_TIMEOUT; using 300 seconds"
+    _bd_timeout=300
+  fi
+  _bd_timeout_backend=none
+  _bd_timeout_command=
+  for _bd_timeout_candidate in timeout gtimeout; do
+    if command -v "$_bd_timeout_candidate" >/dev/null 2>&1; then
+      if _bd_timeout_version="$("$_bd_timeout_candidate" --version 2>/dev/null)"; then
+        case "$_bd_timeout_version" in
+          "timeout (GNU coreutils) "*) _bd_timeout_command=$_bd_timeout_candidate; break ;;
+        esac
+      fi
+    fi
+  done
+  if [ -n "$_bd_timeout_command" ]; then
+    _bd_timeout_backend=coreutils
+    if "$_bd_timeout_command" -- "$_bd_timeout" bd hooks run post-checkout "$@"; then
+      _bd_exit=0
+    else
+      _bd_exit=$?
+    fi
+  elif command -v perl >/dev/null 2>&1; then
+    _bd_timeout_backend=perl
+    if perl -e 'alarm shift; exec @ARGV' -- "$_bd_timeout" bd hooks run post-checkout "$@"; then
+      _bd_exit=0
+    else
+      _bd_exit=$?
+    fi
+  else
+    echo >&2 "beads: hook 'post-checkout' running without timeout; install coreutils or perl to enable BEADS_HOOK_TIMEOUT"
+    if bd hooks run post-checkout "$@"; then
+      _bd_exit=0
+    else
+      _bd_exit=$?
+    fi
+  fi
+  if { [ "$_bd_timeout_backend" = coreutils ] && [ "$_bd_exit" -eq 124 ]; } || { [ "$_bd_timeout_backend" = perl ] && [ "$_bd_exit" -eq 142 ]; }; then
+    echo >&2 "beads: hook 'post-checkout' timed out after ${_bd_timeout}s — continuing without beads"
+    _bd_exit=0
+  fi
+  if [ "$_bd_exit" -eq 3 ]; then
+    echo >&2 "beads: database not initialized — skipping hook 'post-checkout'"
+    _bd_exit=0
+  fi
+  if [ "$_bd_exit" -ne 0 ]; then exit "$_bd_exit"; fi
+fi
+# --- END BEADS INTEGRATION v1.3.0 ---

.beads/hooks/post-merge

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+#!/usr/bin/env sh
+# --- BEGIN BEADS INTEGRATION v1.3.0 ---
+# This section is managed by beads. Do not remove these markers.
+if command -v bd >/dev/null 2>&1; then
+  export BD_GIT_HOOK=1
+  _bd_timeout=${BEADS_HOOK_TIMEOUT:-300}
+  case "$_bd_timeout" in
+    *[!0-9]*|'') _bd_timeout_invalid=1 ;;
+    *[1-9]*) _bd_timeout_invalid=0 ;;
+    *) _bd_timeout_invalid=1 ;;
+  esac
+  if [ "$_bd_timeout_invalid" -eq 1 ]; then
+    echo >&2 "beads: invalid BEADS_HOOK_TIMEOUT; using 300 seconds"
+    _bd_timeout=300
+  fi
+  _bd_timeout_backend=none
+  _bd_timeout_command=
+  for _bd_timeout_candidate in timeout gtimeout; do
+    if command -v "$_bd_timeout_candidate" >/dev/null 2>&1; then
+      if _bd_timeout_version="$("$_bd_timeout_candidate" --version 2>/dev/null)"; then
+        case "$_bd_timeout_version" in
+          "timeout (GNU coreutils) "*) _bd_timeout_command=$_bd_timeout_candidate; break ;;
+        esac
+      fi
+    fi
+  done
+  if [ -n "$_bd_timeout_command" ]; then
+    _bd_timeout_backend=coreutils
+    if "$_bd_timeout_command" -- "$_bd_timeout" bd hooks run post-merge "$@"; then
+      _bd_exit=0
+    else
+      _bd_exit=$?
+    fi
+  elif command -v perl >/dev/null 2>&1; then
+    _bd_timeout_backend=perl
+    if perl -e 'alarm shift; exec @ARGV' -- "$_bd_timeout" bd hooks run post-merge "$@"; then
+      _bd_exit=0
+    else
+      _bd_exit=$?
+    fi
+  else
+    echo >&2 "beads: hook 'post-merge' running without timeout; install coreutils or perl to enable BEADS_HOOK_TIMEOUT"
+    if bd hooks run post-merge "$@"; then
+      _bd_exit=0
+    else
+      _bd_exit=$?
+    fi
+  fi
+  if { [ "$_bd_timeout_backend" = coreutils ] && [ "$_bd_exit" -eq 124 ]; } || { [ "$_bd_timeout_backend" = perl ] && [ "$_bd_exit" -eq 142 ]; }; then
+    echo >&2 "beads: hook 'post-merge' timed out after ${_bd_timeout}s — continuing without beads"
+    _bd_exit=0
+  fi
+  if [ "$_bd_exit" -eq 3 ]; then
+    echo >&2 "beads: database not initialized — skipping hook 'post-merge'"
+    _bd_exit=0
+  fi
+  if [ "$_bd_exit" -ne 0 ]; then exit "$_bd_exit"; fi
+fi
+# --- END BEADS INTEGRATION v1.3.0 ---