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alleyoop delimiter output

Status: Open.

#179 In t-neumann/slamdunk;

· MJPayea opened on Aug 28, 2025

Conversion threshold (-c) flag not updated in the documentation

Status: Open.

#177 In t-neumann/slamdunk;

· ycl6 opened on Jul 12, 2025

count.tsv incomplete

Status: Open.

#175 In t-neumann/slamdunk;

· pizzabytes opened on Apr 30, 2025

About SLAMDUNK count

Status: Open.

#174 In t-neumann/slamdunk;

· yfZhang99 opened on Apr 28, 2025

SLAM-DUNK failed to mark labeled reads in Exosomes lncRNA data

Status: Open.

#172 In t-neumann/slamdunk;

· sunsunb opened on Apr 18, 2025

High duplication

Status: Open.

#171 In t-neumann/slamdunk;

· kmin-ryu opened on Apr 17, 2025

Trouble running slamdunk-0.4.3

Status: Open.

#169 In t-neumann/slamdunk;

· xuhangliu opened on Apr 5, 2025

Hi, how do you deal with microRNA

Status: Open.

#166 In t-neumann/slamdunk;

· sunsunb opened on Jan 20, 2025

slamdunk all command treats paired-end reads as separate samples

Status: Open.

#165 In t-neumann/slamdunk;

· hullv opened on Dec 14, 2024

High background mutation of CtoT GtoA mutations

Status: Open.

#164 In t-neumann/slamdunk;

· Error-fre opened on Nov 8, 2024

summary - PCA done for group of samples not for samples, time points

Status: Open.

#163 In t-neumann/slamdunk;

· mmaslon opened on Oct 22, 2024

alleyoop uttrates error

Status: Open.

#161 In t-neumann/slamdunk;

· mmaslon opened on Aug 27, 2024