acinetobacter-baumanii

Here are 2 public repositories matching this topic...

bbeckley-hub / acinetoscope

AcinetoScope: A species-specific computational pipeline for rapid, comprehensive Acinetobacter baumannii outbreak investigation and resistance gene tracking

html bioinformatics pipeline genomics crab antibiotic-resistance abricate environmental-co-markers acinetobacter-baumanii

Updated Jul 27, 2026
Python

refmyoussef-source / Acinetobacter-Pangenomics

Star

An automated bioinformatics pipeline for bacterial pangenome analysis: from NCBI data acquisition to core-genome construction and visualization.

bioinformatics jupyter-notebook biopython phylogenetics amr comparative-genomics pangenomics roary prokka antimicrobial-resistance abricate fasttree acinetobacter acinetobacter-baumanii

Updated Jul 31, 2026
Jupyter Notebook

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