End-to-end NGS variant calling and functional annotation pipeline for Limulus polyphemus using GATK and SnpEff, with biological interpretation of high-impact immune and metabolic variants.

HPC-T-Assembly, a scalable pipeline leveraging high-performance computing (HPC) for de novo transcriptome assembly of large, multi-species RNA-Seq datasets. This tool streamlines the assembly process, optimizing resource allocation and parallelization to handle diverse, complex transcriptomes efficiently.