uk-ecology

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ybaah-biotech / eDNA-sequence-analysis

Python pipeline for eDNA species identification via NCBI BLAST — with LCA taxonomic resolution, uncultured sequence rescue, and alpha-diversity metrics (Shannon H′, Pielou J′).

bioinformatics biopython blast edna ecology metabarcoding environmental-dna nature-conservation ecology-modelling species-identification metabarcoding-pipeline uk-ecology

Updated Jun 11, 2026
Python

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