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A minor bug in Trim Galore 0.6.10

Status: Open.

#1978 In bgruening/galaxytools;

· igormakunin2 opened on Sep 3, 2026

Material Science: Analysing SEM (Scanning Electron Microscopy) MESH images

Status: Open.

#1957 In bgruening/galaxytools;

· anuprulez opened on Aug 14, 2026

CI: recurring workflow failures (slash-command dispatch dead, push-to-master fatal, Node 20 deprecation)

Status: Open.

#1944 In bgruening/galaxytools;

· arash77 opened on Jul 30, 2026

mumento tool request

plan-readygxy-tool-bot plan ready for reviewgxy-tool-bot plan ready for review

pr-openedgxy-tool-bot opened a pr for a planned toolgxy-tool-bot opened a pr for a planned tool

ready-to-implementgxy-tool-bot plan is reviewed and approvedgxy-tool-bot plan is reviewed and approved

tool-requestgxy-tool-bot requested toolgxy-tool-bot requested tool

Status: Open.

#1929 In bgruening/galaxytools;

· bgruening opened on Jul 25, 2026

Port Galaxy Aries tools

Status: Open.

#1924 In bgruening/galaxytools;

· paulzierep opened on Jul 24, 2026

sylph wrapper doesn't sanitize file names appropriately

Status: Open.

#1899 In bgruening/galaxytools;

· scottcain opened on Jun 26, 2026

Enhancement: adjust newline handling in tp_unfold_column_tool when unfolding the final column

Status: Open.

#1852 In bgruening/galaxytools;

· jennaj opened on Apr 27, 2026

tiara tool still not working reliably

Status: Open.

#1808 In bgruening/galaxytools;

· wm75 opened on Mar 13, 2026

tp_text_file_with_recurring_lines wrongly/unexpectedly substitutes ; with X

Status: Open.

#1800 In bgruening/galaxytools;

· kostrykin opened on Mar 9, 2026

cellpose remove gpu parameter

Status: Open.

#1722 In bgruening/galaxytools;

· bernt-matthias opened on Nov 17, 2025

Idea of new tool / functionnalities for YOLO image processing tools: yolosegment2json

Status: Open.

#1661 In bgruening/galaxytools;

· yvanlebras opened on Jul 20, 2025

Special input breaks toolshed.g2.bx.psu.edu/repos/bgruening/split_file_on_column/tp_split_on_column/0.6

Status: Open.

#1635 In bgruening/galaxytools;

· domgz opened on Jun 10, 2025