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Pull requests: gc-os-ai/pyaptamer

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Pull requests list

[BUG] Inconsistent pipeline design and missing return type hints in dataset loaders
#407 opened Apr 14, 2026 by TrishaG189 Loading…
1 of 3 tasks
1
[ENH] PSeAAC support for MoleculeLoader and transformer refactor
#403 opened Apr 13, 2026 by archittmittal • Draft
1
1
[ENH] move pairs_to_features, generate_kmer_vecs and other utilities to transformer interface #174
#402 opened Apr 13, 2026 by purvanshjoshi Loading…
3 tasks done
1
[BUG] Fix dna2rna docstring parameter name mismatch
#401 opened Apr 13, 2026 by adarshh347 Contributor Loading…
2 of 3 tasks
1
[BUG] Validate DNA input for AptaNet k-mers
#399 opened Apr 13, 2026 by prashu0705 Loading…
2 of 3 tasks
1
9
[BUG] Fix duplicated words in AptaTrans docstring and comment
#398 opened Apr 13, 2026 by adarshh347 Contributor Loading…
2 of 3 tasks
1
Fix: Use 18 physicochemical properties instead of 21 in AptaNet (Issue #173)
#396 opened Apr 13, 2026 by sahilshingate01 Loading…
[BUG] fix load_from_rcsb to return MoleculeLoader instead of raw Structure
#395 opened Apr 12, 2026 by kunal14901 Loading…
3 tasks done
15
[DOC] Complete unfilled placeholder in MoleculeLoader docstring
#394 opened Apr 12, 2026 by NoorMajdoub Loading…
1 of 3 tasks
1
ci: remove redundant checkout step in code-quality job
#389 opened Apr 12, 2026 by neha222222 Loading…
3 tasks
1
fix: use IUPAC 'X' instead of 'N' for unknown amino acids
#388 opened Apr 12, 2026 by neha222222 Loading…
3 tasks
1
[BUG] Fix recommend() infinite loop when MCTS returns duplicate candidates
#385 opened Apr 12, 2026 by tarun-227 Loading…
2 tasks done
1
[DOC] fix encode_rna docstring: correct domain (RNA not protein) and grammar
#384 opened Apr 12, 2026 by rupeshca007 Loading…
1 of 4 tasks
1
[BUG] seq2vec silently drops unknown characters instead of mapping to index 0
#382 opened Apr 12, 2026 by rupeshca007 Loading…
1 of 4 tasks
1
[ENH] Improve AptaTrans test coverage for pretrained weight loading. …
#380 opened Apr 12, 2026 by Swizknife Loading…
1
[ENH] Add protein word frequency utility with tests (Issue #172)
#379 opened Apr 12, 2026 by MayankDew08 Loading…
1
[BUG] Fix GreedyEncoder max_len type hint and add tests (#376)
#378 opened Apr 12, 2026 by sohamjadhav95 Loading…
3 tasks done
1
1
[BUG] fix: add missing max_len to GreedyEncoder.get_test_params param0 (closes #376)
#377 opened Apr 12, 2026 by Blackphoenix-15 Loading…
1 of 3 tasks
1
[BUG] fix: rna2vec preserves short sequences as zero rows (closes #363)
#375 opened Apr 12, 2026 by Blackphoenix-15 Loading…
2 tasks
1
[BUG] fix: sklearn compat shim for validate_data import (closes #365)
#374 opened Apr 12, 2026 by Blackphoenix-15 Loading…
2 tasks
1
fix(rna2vec): always append padded sequence when all triplets are unknown
#373 opened Apr 11, 2026 by maniktyagi04 Loading…
1
fix: sklearn compat for validate_data import (issue #365)
#371 opened Apr 11, 2026 by mani-baktha Loading…
[DOC] Fix typo and duplicated phrase in MCTS class docstring
#370 opened Apr 11, 2026 by rupeshca007 Loading…
1
[BUG] Fix typos in APIDataset docstring
#368 opened Apr 11, 2026 by rupeshca007 Loading…
1
[BUG] Replace AlphaDropout with Dropout in AptaNet layers (ReLU misma…
#362 opened Apr 10, 2026 by kunal14901 Loading…
3 tasks done
4
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